EST details — SGN-E286883
Search information |
Request: 286883 | Match: SGN-E286883 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C75535 | Clone name: cLES-14-H20 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C190481 [TUS-60-I7] | Trace: SGN-T341181 | EST: SGN-E540306 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C190481 [TUS-60-I7] | Trace: SGN-T341184 | EST: SGN-E540309 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E286883 | Length: 430 bp (821 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286883 [] (trimmed)
TTTTCGAGCTAACGGACGATTGTCGCCGTCGTTGAAGTAGAAAAGATGACCAATTACCGGCCATCCTCCGGCAATTTCCGGTGGTAATGGTAGTT
TTGACGATTTTTTTGTCGATAGGATGAAGTAGAAGAGGAATGCGAGTGTTAACAGTGCGACAATGGCGGCTTCCATGGGAGAAAGAAGAAGAAGA
AGAAGATCAAATTTCATGTTTAGAAAGTTATTATGAGTATTGACGTACAATTATGATGCATGGAACTTGTTTTTATAGTGTCAACCTTCGATTCT
TCAGTTCGATTTAATTAAATTTTGATTCAATTTTTAGAAAAGTTGCATCATATTTCAAATCAAATTAAATCGCTTCGTTTTGGTTTTTTCTACTT
CGGTTCAATTTAATTCAATGTAGTTAAATCAATTTTTCGGTGTAAATAAA
TTGACGATTTTTTTGTCGATAGGATGAAGTAGAAGAGGAATGCGAGTGTTAACAGTGCGACAATGGCGGCTTCCATGGGAGAAAGAAGAAGAAGA
AGAAGATCAAATTTCATGTTTAGAAAGTTATTATGAGTATTGACGTACAATTATGATGCATGGAACTTGTTTTTATAGTGTCAACCTTCGATTCT
TCAGTTCGATTTAATTAAATTTTGATTCAATTTTTAGAAAAGTTGCATCATATTTCAAATCAAATTAAATCGCTTCGTTTTGGTTTTTTCTACTT
CGGTTCAATTTAATTCAATGTAGTTAAATCAATTTTTCGGTGTAAATAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E286883] | SGN-U582132 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T100704 [Download] [View] | Facility Assigned ID: TPSCD46TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.932 | Expected Error Rate: 0.0001 | Quality Trim Threshold: 12.5 |