EST details — SGN-E287841
Search information |
Request: 287841 | Match: SGN-E287841 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C76752 | Clone name: cLES-19-A19 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185573 is on microarray TOM1: SGN-S1-1-6.4.9.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185573 [TUS-47-L19] | Trace: SGN-T192630 | EST: SGN-E391304 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E287841 | Length: 538 bp (883 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287841 [] (trimmed)
CAGGCCGCCCACTCAATCTTCACCACAACCAGCACTACCAATTCTTTCTTATACCCAATTTCTTCTTCTTCTTCTTCCCCTAACATTAACTCTTC
TTTCCATGGTGTTTCACTTAATGTTAAGTCAAAATTTGGCCAATCTTTGACCCTTTATGCTGTCACTACCCCTAAACCCCTTACTGTTTTTGCTG
CTACTAAGAAAGCTGTTGCTGTCCTTAAGGGCAACTCTAATGCTGAGGGGGTTGTCACTCTATCTCAAGATGATGATGGTCCAACTACGGATAAT
GTTCGTATAACTGGACTTGCTCCTGGACTTCACGGGTTTCATTTACATGAATATGGTGACACTACAAACGGATGTATGTCTACAGGAGCCCATTT
TAATCCGAATAAATTGACACATGGAGCTCCTGGAGATGAAATCCGTCATGCGGGTGACCTGTGAAACATAGTGGCCAATGCCGATGGCGTGGCTG
AAGTGACACTTGTAGATAATCAGATACCATTGACCGGTCCAAACTCAGTTGTTGGACGAGCAC
TTTCCATGGTGTTTCACTTAATGTTAAGTCAAAATTTGGCCAATCTTTGACCCTTTATGCTGTCACTACCCCTAAACCCCTTACTGTTTTTGCTG
CTACTAAGAAAGCTGTTGCTGTCCTTAAGGGCAACTCTAATGCTGAGGGGGTTGTCACTCTATCTCAAGATGATGATGGTCCAACTACGGATAAT
GTTCGTATAACTGGACTTGCTCCTGGACTTCACGGGTTTCATTTACATGAATATGGTGACACTACAAACGGATGTATGTCTACAGGAGCCCATTT
TAATCCGAATAAATTGACACATGGAGCTCCTGGAGATGAAATCCGTCATGCGGGTGACCTGTGAAACATAGTGGCCAATGCCGATGGCGTGGCTG
AAGTGACACTTGTAGATAATCAGATACCATTGACCGGTCCAAACTCAGTTGTTGGACGAGCAC
Unigenes |
Current Unigene builds | |||||
[SGN-E287841] | SGN-U583863 | Tomato 200607 | Build 2 | 49 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T101898 [Download] [View] | Facility Assigned ID: TPSCU10TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0206 | Quality Trim Threshold: 14.5 |