EST details — SGN-E288101
Search information |
Request: 288101 | Match: SGN-E288101 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C79024 | Clone name: cLES-7-I5 |
| ||
Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C190255 [TUS-59-O21] | Trace: SGN-T340793 | EST: SGN-E539918 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C190255 [TUS-59-O21] | Trace: SGN-T340796 | EST: SGN-E539921 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E288101 | Length: 611 bp (859 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E288101 [] (trimmed)
CAGATTAGTCCATCACCATGGCTTTCCAAGTAGAACCAAAACTTCCCATAATTGAGTTCACAAATGAGACCTTGAGGAGTGGCACAACCTCATGG
TTATCGACGTCTCGAGAAATCCGATGCGCGTTGGAAGAGTACGGTTGCTTTGCGGCAGTGTACAAGAAAGTCATGCCGGAGCTAAGGGAAGCCAT
GTTTGATCATTGCAAGGAGTTGTTTAAACTTCCCTTAGAAACTAAACTCAAAAATAATAGTGATATTTATGGTTTTGGTTATAGTGGGAAATTTA
GCACTATGCCTCTAGCTGAATTTTTTGGTATCGTCAATGGAGAAACTATTGATGCAACTAAGGATTTTGCTAACAAGATGTGGCCAAATGACAAC
GTTCATAAATACTGTGAAGAATCGATTTCATATTCAAAATTAATTGTTGAACTAGACGATACGATTATTCGTATGATATTGGAGTGTTATGGCAT
AGAGAAACATTATGAAGCTCTAAAAAATTCATGTATGTATTTGATGAGATTAATTAAATATCGAAGCCCAAAAAATGATGAAAAAAGTATAGGTC
ATTTACCTCATAGAGATAAATCATTTATGGGAATTATTGAC
TTATCGACGTCTCGAGAAATCCGATGCGCGTTGGAAGAGTACGGTTGCTTTGCGGCAGTGTACAAGAAAGTCATGCCGGAGCTAAGGGAAGCCAT
GTTTGATCATTGCAAGGAGTTGTTTAAACTTCCCTTAGAAACTAAACTCAAAAATAATAGTGATATTTATGGTTTTGGTTATAGTGGGAAATTTA
GCACTATGCCTCTAGCTGAATTTTTTGGTATCGTCAATGGAGAAACTATTGATGCAACTAAGGATTTTGCTAACAAGATGTGGCCAAATGACAAC
GTTCATAAATACTGTGAAGAATCGATTTCATATTCAAAATTAATTGTTGAACTAGACGATACGATTATTCGTATGATATTGGAGTGTTATGGCAT
AGAGAAACATTATGAAGCTCTAAAAAATTCATGTATGTATTTGATGAGATTAATTAAATATCGAAGCCCAAAAAATGATGAAAAAAGTATAGGTC
ATTTACCTCATAGAGATAAATCATTTATGGGAATTATTGAC
Unigenes |
Current Unigene builds | |||||
[SGN-E288101] | SGN-U572959 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T98857 [Download] [View] | Facility Assigned ID: TPSAY51TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.957 | Expected Error Rate: 0.0064 | Quality Trim Threshold: 14.5 |