EST details — SGN-E288602
| Search information |
| Request: 288602 | Match: SGN-E288602 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C79402 | Clone name: cLES-8-N18 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C190307 [TUS-60-B1] | Trace: SGN-T340882 | EST: SGN-E540007 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C190307 [TUS-60-B1] | Trace: SGN-T340885 | EST: SGN-E540010 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E288602 | Length: 521 bp (839 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E288602 [] (trimmed)
TTTTTTCAACCCAATAAGCACATTCCTCTTATAAGATCCATCCCAATAACATGTAAGTTCAAGGACTCTAACCACACACAAATTCACATTTCATT
TGTTAATCACCAAAAACATCTTAAGAATCAACAAAAAGCAAGTAGAATGTATCACTCACATTAACTTGCACAAAGAAATTCTTTGGCTCATAACA
ACTGCTGATCTTGAAAAAGGAAGAAAAACAGATATTTACAAAGAGAGACGAGAAAAGTAGCATTGTTCATGATTTACCAGCTTTTGTCCCATCAG
AATACCTCTGTCATTTCAATATTCTTTTGATTGCTTGGTACTTGTTCAATCACATTGTTGCTATCTTTAACTGATCTCGATCCTACTGTTCTTGT
ATAGCACTGAGTTAGAACCAAAGAAGCACATCTAAGAACTACATTTGCACTATTTGCAATTATAGAGCTTAAATATAGCCAGTGTTTTCTGACTA
AACGAACGATTGAGATCAAAAATACAATTCCACATATAGCACCTGA
TGTTAATCACCAAAAACATCTTAAGAATCAACAAAAAGCAAGTAGAATGTATCACTCACATTAACTTGCACAAAGAAATTCTTTGGCTCATAACA
ACTGCTGATCTTGAAAAAGGAAGAAAAACAGATATTTACAAAGAGAGACGAGAAAAGTAGCATTGTTCATGATTTACCAGCTTTTGTCCCATCAG
AATACCTCTGTCATTTCAATATTCTTTTGATTGCTTGGTACTTGTTCAATCACATTGTTGCTATCTTTAACTGATCTCGATCCTACTGTTCTTGT
ATAGCACTGAGTTAGAACCAAAGAAGCACATCTAAGAACTACATTTGCACTATTTGCAATTATAGAGCTTAAATATAGCCAGTGTTTTCTGACTA
AACGAACGATTGAGATCAAAAATACAATTCCACATATAGCACCTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E288602] | SGN-U580546 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T99122 [Download] [View] | Facility Assigned ID: TPSBF81TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.932 | Expected Error Rate: 0.0075 | Quality Trim Threshold: 14.5 |
Working
