Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E289062

Search information 
Request: 289062Match: SGN-E289062
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C76631Clone name: cLES-18-K17
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C179187 is on microarray TOM1: SGN-S1-1-8.2.2.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179187 [TUS-31-B17] Trace: SGN-T185358 EST: SGN-E373220 Direction: 3' Facility: INRA
Clone: SGN-C179187 [TUS-31-B17] Trace: SGN-T185359 EST: SGN-E373221 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E289062Length: 541 bp (858 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E289062 [] (trimmed) TAGATTGTATAATTGTTTTTGAATAAAGAAATACAAGTGGAGTTTTCTGGTTGTTGAATTGACTAGGGAAGGGATTCTTGGTGAACCACAAATCA
ACAAAACCAATGATTCTGTTTATGTTGAGCTTTCATTTTCTTTGAAGTTGATTTTTGTTGTTGAGGTTGTTGTTTTATGTTGTTTGACTTCAATT
TAAGCAACCCCTTTTCTTTCTTTCTCTTAAAGTTGTCTCTTTTTTTTGGGAAATTGTAACTGTAATGGACTTTGTTTCTTCATCTGTGTTGCTCA
AGAATTGCTTGGAAGTGAAGAATTTGAATTGATCTTGAATGGGTATGGCAAAAAGATTATATTTTTTGAGGTTTAAGAGGAAAAAGTATGGAGTT
TTGCTTAGAGTTCTTTTTAGTTTATGGTTCATCCTTGAAGGGATTTGCCCAGTAATGGGTGTCAGGCCTCTCAGAGAAAGATACCGTTCGTGGGG
AGATGAGTGGCTTCGGGTAAGAAAGGATGAGAATGAATTGGGGCCTTTTTCTGCTTGGAATATAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E289062] SGN-U563243 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T101504 [Download] [View] Facility Assigned ID: TPSCQ69TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.912 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5