EST details — SGN-E289352
| Search information |
| Request: 289352 | Match: SGN-E289352 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C76665 | Clone name: cLES-18-L8 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179199 is on microarray TOM1: SGN-S1-1-4.3.2.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179199 [TUS-31-C5] | Trace: SGN-T185095 | EST: SGN-E372638 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179199 [TUS-31-C5] | Trace: SGN-T185096 | EST: SGN-E372639 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289352 | Length: 422 bp (984 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289352 [] (trimmed)
TGTATTTGTTGACGAGTTTAGCTGCATAGGCTGCAAAAATTGTGCCAATGTTTGCTCAAAAGTGTTTGGGATTGAGGAAGACTTTGGAAGAGCTA
GAGTTTACGATCAATGTGGACACCCTGATTTAATTCAACAAGCTATAGATAGCTGCCCAGTGGATTGCATACATTGGACTTCTGCTGCACAGCTG
TCTTTGCTTGAGGATGAAATGCGAAGAATAGAAAGAGTAAACGTTGCCTTGATGCTATCAGGAATGGGCAGTGGAGCCATGGATGTATTCAGAAT
GGCGAGCACGCGGTGGGAAAAACGACAATCTAAAGTTCTGGAACAAGCTAAAGTCAGAATGATGAAGAAGAAAAATTCTGAGAAAACTGAATCAT
ACTGGGATAACCTATGGGGCGATCGTNAAGACTACACAAAGA
GAGTTTACGATCAATGTGGACACCCTGATTTAATTCAACAAGCTATAGATAGCTGCCCAGTGGATTGCATACATTGGACTTCTGCTGCACAGCTG
TCTTTGCTTGAGGATGAAATGCGAAGAATAGAAAGAGTAAACGTTGCCTTGATGCTATCAGGAATGGGCAGTGGAGCCATGGATGTATTCAGAAT
GGCGAGCACGCGGTGGGAAAAACGACAATCTAAAGTTCTGGAACAAGCTAAAGTCAGAATGATGAAGAAGAAAAATTCTGAGAAAACTGAATCAT
ACTGGGATAACCTATGGGGCGATCGTNAAGACTACACAAAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289352] | SGN-U566991 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101794 [Download] [View] | Facility Assigned ID: TPSCT64TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0101 | Quality Trim Threshold: 14.5 |
Working
