EST details — SGN-E289615
Search information |
Request: 289615 | Match: SGN-E289615 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C87358 | Clone name: cLET-4-D21 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C190659 [TUS-60-P17] | Trace: SGN-T341487 | EST: SGN-E540612 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C190659 [TUS-60-P17] | Trace: SGN-T349289 | EST: SGN-E548414 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E289615 | Length: 317 bp (886 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289615 [] (trimmed)
GTATTGTAAAGGTCATCCAGATAATAGTCGCTTAATTGAAATTGATGAAAATGAGAGTGGGGAGGTTGTGCTTCCTGGTGGAATTTCAATACCTA
ATGTGTCAAAATCTATCAAATGTGATAAAGGAGAACACACACGGGTTGGCTCTGATGTTCTTTCTTTCCAGCAGATGTCAGAGCAGTTCAATCAG
GAAGTATCCGTGAATGGTAAAATTCCTTCGGCGCTCTTCAATACTATGTTCGAGTTTTCTGGTTCTTGGCAGAACGATGCTGCATACACTAAAAC
CCTTGCTTTTGATGGTGTGTTCATCACGTTGT
ATGTGTCAAAATCTATCAAATGTGATAAAGGAGAACACACACGGGTTGGCTCTGATGTTCTTTCTTTCCAGCAGATGTCAGAGCAGTTCAATCAG
GAAGTATCCGTGAATGGTAAAATTCCTTCGGCGCTCTTCAATACTATGTTCGAGTTTTCTGGTTCTTGGCAGAACGATGCTGCATACACTAAAAC
CCTTGCTTTTGATGGTGTGTTCATCACGTTGT
Unigenes |
Current Unigene builds | |||||
[SGN-E289615] | SGN-U585158 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T103286 [Download] [View] | Facility Assigned ID: TMEAO23TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.960 | Expected Error Rate: 0.0144 | Quality Trim Threshold: 14.5 |