EST details — SGN-E290170
Search information |
Request: 290170 | Match: SGN-E290170 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C87642 | Clone name: cLET-5-G11 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C190687 [TUS-61-A21] | Trace: SGN-T341535 | EST: SGN-E540660 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C190687 [TUS-61-A21] | Trace: SGN-T341538 | EST: SGN-E540663 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E290170 | Length: 538 bp (848 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290170 [] (trimmed)
GAAAAGCGAGTCAGATGCAGATGATGAAGAAGCAAGGAGTGTGCAACATCATTTAGTGAGAGCATTGGAGAGGAATGGGAAACTGGTGAGCTCCC
AACTTGAAGCTCAGAATATGCAGTTTGAACAGGATAGGGAGCAAAGGAAGGACCATGTTGATAACTTAGTAGCAGTACTTACGAAGCTTGCAGAT
GCTTTGGGAAGAATTGCAGATAAGTTCTAGGGCTGTTGAGTTAATTACAATGCATATCATGTTGTCTTCATACACAAGGCTGAAGTTCAGTTTTG
GTTTGTTAATTAGTAGTTGGAGATGACATGTTCTTCTCAGGTTTTGAAGGGTTAGTGTTGGCACAAGAGGTGTACAGAAGAAATAGTAATAAATA
CAGAATTTGGAGAGGCCGGTGTCTTTGTTAATTCCTGTTTATATACACAAATATCTCTTGTTTTGTCACAATTGTCAGGCAGGTAGGAAGAATCC
TTTTGTTTATGAGCGACCTTAATTCTTATCTCACTACTTGGGGATTGCTTGCTCGGTTTGGGG
AACTTGAAGCTCAGAATATGCAGTTTGAACAGGATAGGGAGCAAAGGAAGGACCATGTTGATAACTTAGTAGCAGTACTTACGAAGCTTGCAGAT
GCTTTGGGAAGAATTGCAGATAAGTTCTAGGGCTGTTGAGTTAATTACAATGCATATCATGTTGTCTTCATACACAAGGCTGAAGTTCAGTTTTG
GTTTGTTAATTAGTAGTTGGAGATGACATGTTCTTCTCAGGTTTTGAAGGGTTAGTGTTGGCACAAGAGGTGTACAGAAGAAATAGTAATAAATA
CAGAATTTGGAGAGGCCGGTGTCTTTGTTAATTCCTGTTTATATACACAAATATCTCTTGTTTTGTCACAATTGTCAGGCAGGTAGGAAGAATCC
TTTTGTTTATGAGCGACCTTAATTCTTATCTCACTACTTGGGGATTGCTTGCTCGGTTTGGGG
Unigenes |
Current Unigene builds | |||||
[SGN-E290170] | SGN-U568380 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T103618 [Download] [View] | Facility Assigned ID: TMEAQ42TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.951 | Expected Error Rate: 0.0144 | Quality Trim Threshold: 12.5 |