EST details — SGN-E290170
| Search information |
| Request: 290170 | Match: SGN-E290170 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C87642 | Clone name: cLET-5-G11 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C190687 [TUS-61-A21] | Trace: SGN-T341535 | EST: SGN-E540660 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C190687 [TUS-61-A21] | Trace: SGN-T341538 | EST: SGN-E540663 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E290170 | Length: 538 bp (848 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290170 [] (trimmed)
GAAAAGCGAGTCAGATGCAGATGATGAAGAAGCAAGGAGTGTGCAACATCATTTAGTGAGAGCATTGGAGAGGAATGGGAAACTGGTGAGCTCCC
AACTTGAAGCTCAGAATATGCAGTTTGAACAGGATAGGGAGCAAAGGAAGGACCATGTTGATAACTTAGTAGCAGTACTTACGAAGCTTGCAGAT
GCTTTGGGAAGAATTGCAGATAAGTTCTAGGGCTGTTGAGTTAATTACAATGCATATCATGTTGTCTTCATACACAAGGCTGAAGTTCAGTTTTG
GTTTGTTAATTAGTAGTTGGAGATGACATGTTCTTCTCAGGTTTTGAAGGGTTAGTGTTGGCACAAGAGGTGTACAGAAGAAATAGTAATAAATA
CAGAATTTGGAGAGGCCGGTGTCTTTGTTAATTCCTGTTTATATACACAAATATCTCTTGTTTTGTCACAATTGTCAGGCAGGTAGGAAGAATCC
TTTTGTTTATGAGCGACCTTAATTCTTATCTCACTACTTGGGGATTGCTTGCTCGGTTTGGGG
AACTTGAAGCTCAGAATATGCAGTTTGAACAGGATAGGGAGCAAAGGAAGGACCATGTTGATAACTTAGTAGCAGTACTTACGAAGCTTGCAGAT
GCTTTGGGAAGAATTGCAGATAAGTTCTAGGGCTGTTGAGTTAATTACAATGCATATCATGTTGTCTTCATACACAAGGCTGAAGTTCAGTTTTG
GTTTGTTAATTAGTAGTTGGAGATGACATGTTCTTCTCAGGTTTTGAAGGGTTAGTGTTGGCACAAGAGGTGTACAGAAGAAATAGTAATAAATA
CAGAATTTGGAGAGGCCGGTGTCTTTGTTAATTCCTGTTTATATACACAAATATCTCTTGTTTTGTCACAATTGTCAGGCAGGTAGGAAGAATCC
TTTTGTTTATGAGCGACCTTAATTCTTATCTCACTACTTGGGGATTGCTTGCTCGGTTTGGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290170] | SGN-U568380 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103618 [Download] [View] | Facility Assigned ID: TMEAQ42TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0144 | Quality Trim Threshold: 12.5 |
Working
