EST details — SGN-E290323
Search information |
Request: 290323 | Match: SGN-E290323 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C77264 | Clone name: cLES-20-G7 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185586 is on microarray TOM1: SGN-S1-1-1.1.9.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185586 [TUS-47-M8] | Trace: SGN-T191970 | EST: SGN-E390644 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E290323 | Length: 496 bp (824 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290323 [] (trimmed)
TTCAACTTAATATATGTGCTGTGCCTTCTCTAGACTTCTAGTTGATCAACATGGGTAAAGAGAAGGTTCACATCAACATTGTGGTTATTGGCCAT
GTTGACTCTGGCAAATCGACTACCACTGGTCACTTGATCTACAAGCTAGGTGGTATCGATAAACGTGTCATCGAGAGGTTTGAGAAAGAAGCTGC
TGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTTCTTGACAAGCTCAAGGCTGAACGTGAACGCGGTATCACTATTGATATTGCCTTGTGGA
AGTTTGAGACTACCAAGTACTATTGTACTGTCATTGATGCTCCTGGTCATAGGGATTTCATCAAGAACATGATTACTGGTACCTCTCAAGCTGAC
TGTGCTGTCCTGATTATCGACTCCACGACTGGTGGTTTTGAAGCTGGTATCTCTAAGGATGGACAGACTCGTGAACATGCGTTGCTTGCTTTCAC
ACTTGGTGTTAGGCAAATGAT
GTTGACTCTGGCAAATCGACTACCACTGGTCACTTGATCTACAAGCTAGGTGGTATCGATAAACGTGTCATCGAGAGGTTTGAGAAAGAAGCTGC
TGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTTCTTGACAAGCTCAAGGCTGAACGTGAACGCGGTATCACTATTGATATTGCCTTGTGGA
AGTTTGAGACTACCAAGTACTATTGTACTGTCATTGATGCTCCTGGTCATAGGGATTTCATCAAGAACATGATTACTGGTACCTCTCAAGCTGAC
TGTGCTGTCCTGATTATCGACTCCACGACTGGTGGTTTTGAAGCTGGTATCTCTAAGGATGGACAGACTCGTGAACATGCGTTGCTTGCTTTCAC
ACTTGGTGTTAGGCAAATGAT
Unigenes |
Current Unigene builds | |||||
[SGN-E290323] | SGN-U580191 | Tomato 200607 | Build 2 | 66 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T102002 [Download] [View] | Facility Assigned ID: TPSCY40TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |