EST details — SGN-E290461

Search information 
Request: 290461Match: SGN-E290461
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C77330Clone name: cLES-20-J6
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C179317 is on microarray TOM1: SGN-S1-1-6.4.2.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179317 [TUS-31-H3] Trace: SGN-T185388 EST: SGN-E373250 Direction: 3' Facility: INRA
Clone: SGN-C179317 [TUS-31-H3] Trace: SGN-T185389 EST: SGN-E373251 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E290461Length: 623 bp (873 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E290461 [] (trimmed) TTTTTTTTGAGTAAAGTCTGTTATCTATGTATAACTAGAGAAAAGCCAGATTTTGGTATGTTGTATGGAGAGGATATGTATGACATATTTGCCTG
GTATGTACACAGATGAATAGAGTTTTTTCGTTTCTGCGCCTCCTCGGATACCACATTGCATATCTGAGAGTTACATAGGAGCAATTAAGTTGAAA
TGATCCCAAGCTTCCTGCAGAATATCAAAAACTTTTGCTGCAATGTATTTCTGGTGAGCAGCAGCTCCCTTTTGTTGGAGCTTATCTGGATGTAT
GTAGAGTAACGCTCTCTGATAAGCTCTCTTCACTTGATTTCCTTCCATTAAATCCATTAAGGCCACAGGTTTCCATCCGCTCTCGGGCCATAAAA
CTAATTGTAACGTTGAGAGCAATGAACGAATGTTTCCTTTCCTCCCTTGTGACCATTGCTTAATTTTAGCATCTGAAGCTTGGTTATCCTCGGAT
TTTCCATTAGTTTGTGAAGCTGTGTCCTGATCTTCAAATAATTCTTCCACCACAAAATTTCCACCAAAGAGCTCATCCATGTTTCCAACTGAGAC
TTTGCGATCATCTCGTCTTGACTCATTAGTTGACGGAGCAGCCTTTTGATCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E290461] SGN-U584330 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T102140 [Download] [View] Facility Assigned ID: TPSDB51TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0064 Quality Trim Threshold: 14.5