EST details — SGN-E290638

Search information 
Request: 290638Match: SGN-E290638
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C77440Clone name: cLES-20-P12
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C179359 is on microarray TOM1: SGN-S1-1-4.1.2.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179359 [TUS-31-I21] Trace: SGN-T185135 EST: SGN-E372678 Direction: 3' Facility: INRA
Clone: SGN-C179359 [TUS-31-I21] Trace: SGN-T185136 EST: SGN-E372679 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E290638Length: 519 bp (884 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E290638 [] (trimmed) GAGATTATACCCAGCACTCACCCTTATGCGAAGCACCTCAAAGGACACTAAATTGGGAGAAATGACAATTCCTGCAGGAGTACAAATTTTTGTGC
CTATATACATAGCACATCGCGACCCCCAAGTATGGGGAGACGATGCACTGATTTTCAATCCAAATAGGTTCTCAGAAGGGGTATCCAAAGCTGCA
AAAGAGCCATTGTATTTCCCCTTCGGTTGGGGTCCTCGAATGTGCATTGGTAATAACTTTGGAATGGCAGAAGCAAAGCTCGTTTTATCTCAAAT
TCTGCAGAGGTTTTGGTTCAAGCTCTCTCCTTCCTATGTTCATGCCCCTCAGGCAATACTCGTTATGAAGCCTCAGTATGGTGCTCAGATAATCC
TCAACAAGCTCTGATGGTTTACTTAATTATCACAACTACTAGTACTAGTTCAATAAATGAGGTTCATATGTATTCTGCATTTCAATACCATGTTA
TTTTTGTATGTGTGACAAACTCTCATTAGCACTATTAAATAATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E290638] SGN-U578058 Tomato 200607 Build 2 108 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T102317 [Download] [View] Facility Assigned ID: TPSDB90TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0032 Quality Trim Threshold: 12.5