EST details — SGN-E292446
| Search information |
| Request: 292446 | Match: SGN-E292446 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82358 | Clone name: cLET-1-L12 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179531 is on microarray TOM1: SGN-S1-1-8.1.1.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179531 [TUS-32-A1] | Trace: SGN-T1535 | EST: SGN-E378289 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C179531 [TUS-32-A1] | Trace: SGN-T185705 | EST: SGN-E373042 | Direction: 5' | Facility: INRA |
| Clone: SGN-C179531 [TUS-32-A1] | Trace: SGN-T185791 | EST: SGN-E373128 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292446 | Length: 475 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292446 [] (trimmed)
GACTCTCAGCAGATCGAGCAAAAATCAAAGGGGATGGCGCCGCCGAACACAGGATTAGCAGTGGGATTGAACAAAGGACACATTGTAACCAAGAA
GGAGTTAGCTCCACGCCCTTCTGACAGAAAAGGGAAAACCAGCAAAAGAATCCACTTCGTCAGGAGCCTCATCAGAGAAGTTGCTGGATTTGCTC
CATATGAGAAGAGGATTACTGAGCTTCTTAAAGTTGGTAAGGACAAGCGTGCATTGAAGGTAGCCAAGAGGAAGTTGGGTACCCACAACAGGGCA
AAGAAGAAGAGAGAGGAGATGTCCAGCGTTCTCCGTAAGATGAAGGCAACCGGTGGTGGTGAAAAGAAGAAGAGAAGTCTCTATCCTTATTTTGA
CAATTGAGGAACTGAGTTTATTAGTTAATACATGATCTTTTTGAGTTAGCTATAAAATTCTCTAAACTTTGACACAATTATGGCTTTGAATTTTC
GGAGTTAGCTCCACGCCCTTCTGACAGAAAAGGGAAAACCAGCAAAAGAATCCACTTCGTCAGGAGCCTCATCAGAGAAGTTGCTGGATTTGCTC
CATATGAGAAGAGGATTACTGAGCTTCTTAAAGTTGGTAAGGACAAGCGTGCATTGAAGGTAGCCAAGAGGAAGTTGGGTACCCACAACAGGGCA
AAGAAGAAGAGAGAGGAGATGTCCAGCGTTCTCCGTAAGATGAAGGCAACCGGTGGTGGTGAAAAGAAGAAGAGAAGTCTCTATCCTTATTTTGA
CAATTGAGGAACTGAGTTTATTAGTTAATACATGATCTTTTTGAGTTAGCTATAAAATTCTCTAAACTTTGACACAATTATGGCTTTGAATTTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292446] | SGN-U580851 | Tomato 200607 | Build 2 | 70 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102720 [Download] [View] | Facility Assigned ID: TMEAD66TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0119 | Quality Trim Threshold: 12.5 |
Working
