EST details — SGN-E292929
| Search information |
| Request: 292929 | Match: SGN-E292929 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C80177 | Clone name: cLET-11-H20 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179671 is on microarray TOM1: SGN-S1-1-4.2.1.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179671 [TUS-32-F21] | Trace: SGN-T186144 | EST: SGN-E372991 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179671 [TUS-32-F21] | Trace: SGN-T186145 | EST: SGN-E372992 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292929 | Length: 537 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292929 [] (trimmed)
TGGAGGTGTTAAGAAGAGTAAGAAGAAAGCGGTGGCGTCGAGTTTTGAGGAATTGGGGTTGACGGAAGAGGTTATGGGGGCTTTAGGTGAAATGG
GTATTTCGGAACCGACTGAGATTCAGTCGATTGGTATACCTGCTGTGATTGAAGGGAAAAGTGTGGTATTGGGTTCACATACGGGTTCTGGGAAG
ACTCTTGCTTATATGTTGCCTATTGTTCAGTTGTTGAGGCGAGATGAGGAATTGGATGGTATGCTCATGAAGCCTAGGCGCCCCCGAGCTGTTGT
GTTGTGCCCTACTAGGGAGCTCTGTGAGCAGGTTTTTCGTGTGGCAAAATCTATCAGTCATCATGCTCGATTTAGATCTACCATGGTTAGTGGTG
GCGGACGTCTGAGACCTCAAGAAGATTGTTTGGCAAGCCCAATTGACATGATTGTGGGGACTCCAGGCAGGGTTCTACAACATATTGAAGAGGGA
AATATGGTTTATGGTGACATCAGATACTTGGTCTTGGATGAGGCTGATACCATGTTTGATCG
GTATTTCGGAACCGACTGAGATTCAGTCGATTGGTATACCTGCTGTGATTGAAGGGAAAAGTGTGGTATTGGGTTCACATACGGGTTCTGGGAAG
ACTCTTGCTTATATGTTGCCTATTGTTCAGTTGTTGAGGCGAGATGAGGAATTGGATGGTATGCTCATGAAGCCTAGGCGCCCCCGAGCTGTTGT
GTTGTGCCCTACTAGGGAGCTCTGTGAGCAGGTTTTTCGTGTGGCAAAATCTATCAGTCATCATGCTCGATTTAGATCTACCATGGTTAGTGGTG
GCGGACGTCTGAGACCTCAAGAAGATTGTTTGGCAAGCCCAATTGACATGATTGTGGGGACTCCAGGCAGGGTTCTACAACATATTGAAGAGGGA
AATATGGTTTATGGTGACATCAGATACTTGGTCTTGGATGAGGCTGATACCATGTTTGATCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292929] | SGN-U562627 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105392 [Download] [View] | Facility Assigned ID: TMEBR46TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0118 | Quality Trim Threshold: 14.5 |
Working
