EST details — SGN-E293225
| Search information |
| Request: 293225 | Match: SGN-E293225 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C80502 | Clone name: cLET-12-H13 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184775 is on microarray TOM1: SGN-S1-1-4.3.14.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184775 [TUS-45-K13] | Trace: SGN-T198582 | EST: SGN-E397256 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184775 [TUS-45-K13] | Trace: SGN-T200013 | EST: SGN-E398687 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293225 | Length: 576 bp (896 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293225 [] (trimmed)
GCAAAACCCCATTTGCCTGAAAGCAACTTTCATTTTGGGTGTTCAAGATTTCAATAAAAAAAAAGTGATTTTTAAGAAGAATTCAAGATTTCAAT
AAAAAAGTGATTTTTAAGAAGAATTCAAGAACCCAAGTTTCCCAAGAAGCAATTTTTACTGTGATTTTACAAGATTTAGCTATGAAGAAAGGATC
TTTTGCACCTAATCTTAAACTCTCTCTTCCTCCTCCTGATGAAGTTGCTCTCTCCAAATTCCTGACTGAATCAGGAACATTTAAGGATGGAGATC
TTCTGGTGAATAGAGATGGAGTTCGAATTGTTTCGCAGAGTGAAGTTGCAGCTCCTTCAGTTATACAGCCATCAGACAACCAGTTATGCTTAGCT
GATTTTGAAGCAGTAAAAGTTATTGGAAAGGGAAATGGTGGTATAGTGCGGCTGGTTCAGCATAAATGGACAGGGCAATTTTTCGCTCTCAAGGT
TATTCAGATGAATATTGATGAGTCTATGCGCAAACATATTGCTCAAGAACTGAGAATTAATCAGTCATCCCAGTGTCCATATGTTGTCATATGCT
ATCAGT
AAAAAAGTGATTTTTAAGAAGAATTCAAGAACCCAAGTTTCCCAAGAAGCAATTTTTACTGTGATTTTACAAGATTTAGCTATGAAGAAAGGATC
TTTTGCACCTAATCTTAAACTCTCTCTTCCTCCTCCTGATGAAGTTGCTCTCTCCAAATTCCTGACTGAATCAGGAACATTTAAGGATGGAGATC
TTCTGGTGAATAGAGATGGAGTTCGAATTGTTTCGCAGAGTGAAGTTGCAGCTCCTTCAGTTATACAGCCATCAGACAACCAGTTATGCTTAGCT
GATTTTGAAGCAGTAAAAGTTATTGGAAAGGGAAATGGTGGTATAGTGCGGCTGGTTCAGCATAAATGGACAGGGCAATTTTTCGCTCTCAAGGT
TATTCAGATGAATATTGATGAGTCTATGCGCAAACATATTGCTCAAGAACTGAGAATTAATCAGTCATCCCAGTGTCCATATGTTGTCATATGCT
ATCAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293225] | SGN-U563022 | Tomato 200607 | Build 2 | 38 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105688 [Download] [View] | Facility Assigned ID: TMEBU43TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 14.5 |
Working
