EST details — SGN-E293548
| Search information |
| Request: 293548 | Match: SGN-E293548 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C81241 | Clone name: cLET-15-D19 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C81241 [cLET-15-D19] | Trace: SGN-T106498 | EST: SGN-E293547 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E293548 | Length: 327 bp (933 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E293548 [] (trimmed)
AGAAAAGCAACATTGTGTATCCATCCTGATAAAGTGCAGCAGAAAGGCGCCACCCTTCAACAGAAATATGTTGCTGAGAAGGTGTTTGACATGCT
CAAGGAAGCATGGAACAAATTCAATTCAGAGGAACTTTTCTAGATGCTGCGTCCATTCATTAGCTTTGATCTACCTTCAGACTTTTTGATAGAAG
AGGTAGCAACAGTTCCAAAGCAATGCTCGTGCTGACTCTGCATGATAATCTTCTTTCATAATGTGGCATGCTGGACTGGTAAAATGGGCCTTTGT
AGCAGTGATGGTCAAGGGCAATATATTACTCTGTTGCTGTAA
CAAGGAAGCATGGAACAAATTCAATTCAGAGGAACTTTTCTAGATGCTGCGTCCATTCATTAGCTTTGATCTACCTTCAGACTTTTTGATAGAAG
AGGTAGCAACAGTTCCAAAGCAATGCTCGTGCTGACTCTGCATGATAATCTTCTTTCATAATGTGGCATGCTGGACTGGTAAAATGGGCCTTTGT
AGCAGTGATGGTCAAGGGCAATATATTACTCTGTTGCTGTAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293548] | SGN-U563059 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T106499 [Download] [View] | Facility Assigned ID: TMECG22TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0168 | Quality Trim Threshold: 14.5 |
Working
