EST details — SGN-E293761
Search information |
Request: 293761 | Match: SGN-E293761 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C82768 | Clone name: cLET-21-H14 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C190978 [TUS-61-M24] | Trace: SGN-T342035 | EST: SGN-E541160 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C190978 [TUS-61-M24] | Trace: SGN-T349379 | EST: SGN-E548504 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E293761 | Length: 466 bp (889 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293761 [] (trimmed)
TTTGTGAATTCTAAATTCTGATCAGAACCCTAATTGAAACAATCGCTAAATCTTCAAATAATCACTTTTCTCTTTCCCAATTTTGATCAATTACA
GCTATGGCGACCAGTGGAAACAAGAATATGAACGCCAAATTGGTGCTCCTTGGGGATGTTGGAGCTGGAAAATCTAGTCTAGTTCTGCGTTTTGT
TAAAGGACAATTTATTGAATTTCAGGAATCAACCATAGGTGCTGCATTTTTCTCTCAAACAGTAGCAGTAAATGATGCAACTGTAAAATTTGAAA
TATGGGATACAGCAGGCCAAGAGAGATACCACAGTCTAGCTCCAATGTATTACAGAGGTGCTGCAGCTGCTATTATTGTTTATGATATAACAAAT
CAAGCATCATTTGATAGAGCAAAAAAATGGGTTCAGGAACTTCAAGCACAAGGTAATCCGAATATGGTGATGGCACTAGCCGGAAA
GCTATGGCGACCAGTGGAAACAAGAATATGAACGCCAAATTGGTGCTCCTTGGGGATGTTGGAGCTGGAAAATCTAGTCTAGTTCTGCGTTTTGT
TAAAGGACAATTTATTGAATTTCAGGAATCAACCATAGGTGCTGCATTTTTCTCTCAAACAGTAGCAGTAAATGATGCAACTGTAAAATTTGAAA
TATGGGATACAGCAGGCCAAGAGAGATACCACAGTCTAGCTCCAATGTATTACAGAGGTGCTGCAGCTGCTATTATTGTTTATGATATAACAAAT
CAAGCATCATTTGATAGAGCAAAAAAATGGGTTCAGGAACTTCAAGCACAAGGTAATCCGAATATGGTGATGGCACTAGCCGGAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E293761] | SGN-U565736 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T107883 [Download] [View] | Facility Assigned ID: TMEDF43TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.952 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 14.5 |