EST details — SGN-E294136

Search information 
Request: 294136Match: SGN-E294136
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C80854Clone name: cLET-13-J17
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179802 is on microarray TOM1: SGN-S1-1-1.4.1.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179802 [TUS-32-L8] Trace: SGN-T186334 EST: SGN-E372853 Direction: 3' Facility: INRA
Clone: SGN-C179802 [TUS-32-L8] Trace: SGN-T186335 EST: SGN-E372854 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E294136Length: 656 bp (861 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E294136 [] (trimmed) GGAATCCTCACCGTGGAGTTCACATCAAAACTTACAAAGCTCACGGCCGTGAAGTCCGCGATGTCCATGTCACTCAGGACAATTCAAAACTTTGT
TCATGTGGTGGCGATCGACAAGTATTTTATTGGGATGTCTCAACAGGTCATGTCATTCGCAAATTTCGTGGCCATGACAGTGAGGTGAATGCTGT
GAAGTTTAATGAATATGCTTCTGTTGTAGTATCAGCAGGATATGATAAATCATTGCGTGTTTGGGATTGCAAATCTCGCAGCACTGAACCAATTC
AGATCATTGATACCTTTCTAGATAGTGTGATGTCAATTTGTCTCACAAAAACTGAGATAATTGCTGGAAGTGTTGATGGAACAGTTCGAACATTT
GACATCAGAGTTGGTAGAGAGATATCTGATAATTTGGGTCAGCCTGTCAACTGTATCTCTCTTTCAAATGATGGCAACTGTATATTAGCAAGTTG
CCTGGATTCAACCCTTCGACTTCTGGACAGGTCTAGTGGTGAACTATTGCAAGAATATAAGGGCCATATTTGCAAGTCTTTCAAAACGGACTGCT
GTCTTACAAACAGTGATGCCCATGTTGCTGGCGGCTCANAAGATGGCTATATCTACTTCTGGGATCTGGTCGATGCGTCAGTTGTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E294136] SGN-U575727 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T105979 [Download] [View] Facility Assigned ID: TMEBY57TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5