EST details — SGN-E294289
Search information |
Request: 294289 | Match: SGN-E294289 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C81035 | Clone name: cLET-14-D20 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184996 is on microarray TOM1: SGN-S1-1-7.4.12.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C81035 [cLET-14-D20] | Trace: SGN-T106133 | EST: SGN-E294290 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E294289 | Length: 515 bp (821 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294289 [] (trimmed)
TTACGGATGGGATACTGCTGGTTTATCTGCTGATCCCGAGGCCTTTGCTAAGAACAGAGCTCTTGAGGTTATCCATGGGAGATGGGCCATGCTTG
GAGCTTTTGGTTGCATTACACCAGAAGTTCTTGAAAAATGGGTAAAAGTGGACTTCAAAGAACCAGTATGGTTCAAAGCTGGAGCCCAGATCTTC
AGTGAAGGTGGGCTGGACTATTTGGGCAACCCAAACCTTGTCCATGCTCAGAGCATTCTAGCAGTATTGGGCTTCCAAGTTGTACTAATGGGCCT
TGTAGAAGGTTTCAGAATTAATGGGCTTCCTGGAGTTGGTGAAGGCAACAATCTCTACCCAGGTGGACAGTACTTTGACCCATTGGGCCTAGCAG
ATGACCCAACAACTTTCGCGGAACTCAAGGTCAAGGAAATCAAGAACGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATT
GTCACCGGCAAAGGCCCACTTGAAAATCTATTGGATCACC
GAGCTTTTGGTTGCATTACACCAGAAGTTCTTGAAAAATGGGTAAAAGTGGACTTCAAAGAACCAGTATGGTTCAAAGCTGGAGCCCAGATCTTC
AGTGAAGGTGGGCTGGACTATTTGGGCAACCCAAACCTTGTCCATGCTCAGAGCATTCTAGCAGTATTGGGCTTCCAAGTTGTACTAATGGGCCT
TGTAGAAGGTTTCAGAATTAATGGGCTTCCTGGAGTTGGTGAAGGCAACAATCTCTACCCAGGTGGACAGTACTTTGACCCATTGGGCCTAGCAG
ATGACCCAACAACTTTCGCGGAACTCAAGGTCAAGGAAATCAAGAACGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATT
GTCACCGGCAAAGGCCCACTTGAAAATCTATTGGATCACC
Unigenes |
Current Unigene builds | |||||
[SGN-E294289] | SGN-U579843 | Tomato 200607 | Build 2 | 157 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T106132 [Download] [View] | Facility Assigned ID: TMECD22TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0122 | Quality Trim Threshold: 12.5 |