EST details — SGN-E294735
Search information |
Request: 294735 | Match: SGN-E294735 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C81674 | Clone name: cLET-17-K11 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C81674 [cLET-17-K11] | Trace: SGN-T106789 | EST: SGN-E294734 | Direction: 5' | Facility: TIGR |
Clone: SGN-C190919 [TUS-61-K13] | Trace: SGN-T349362 | EST: SGN-E548487 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E294735 | Length: 367 bp (870 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E294735 [] (trimmed)
GTAATGTCTAGCTCAACACAATTTTCTCCAGTTATTCAACAGTTATTCGCAAGAAAATCGAACCCATCGTCCATTTCAGCTTTTAAAGCTTCAAA
ATTGGTACTTTTAGTACCAATTTCCCTAAATTGTTCAAGAATTCACTTGGATTTTAAGGTGAGAGTTCAGGTTTTGGAAAATCATGATGGAGAAA
GTTCTGTACAAGATCTTGATGATTCACCTGCTTCGATTGAGCTACAACACATTTCTGATGAACCCCAATTTGATCGAGTTATAGCTGAAGCACAA
CAGCTTGATGAATCTATTGTGATTCTATGGATGGCAAACTGGTGCCGCAAATGCATATACTTGAAACCAAAATTGGAAAAAC
ATTGGTACTTTTAGTACCAATTTCCCTAAATTGTTCAAGAATTCACTTGGATTTTAAGGTGAGAGTTCAGGTTTTGGAAAATCATGATGGAGAAA
GTTCTGTACAAGATCTTGATGATTCACCTGCTTCGATTGAGCTACAACACATTTCTGATGAACCCCAATTTGATCGAGTTATAGCTGAAGCACAA
CAGCTTGATGAATCTATTGTGATTCTATGGATGGCAAACTGGTGCCGCAAATGCATATACTTGAAACCAAAATTGGAAAAAC
Unigenes |
Current Unigene builds | |||||
[SGN-E294735] | SGN-U575364 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T106790 [Download] [View] | Facility Assigned ID: TMECM66TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.961 | Expected Error Rate: 0.0006 | Quality Trim Threshold: 14.5 |