EST details — SGN-E296529
Search information |
Request: 296529 | Match: SGN-E296529 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C82042 | Clone name: cLET-19-J17 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C82042 [cLET-19-J17] | Trace: SGN-T107337 | EST: SGN-E296387 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E296529 | Length: 663 bp (847 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E296529 [] (trimmed)
GATTTGTATTGTGATAAAGAGTAGGTGGAGGAAAGAACACAGATAGAGAAAGATTTTGAGCAAATAAAAGAACAAGTTGAGGGAGTTGCTGAGAA
GGGCGAATTGGGTTTGGAAGAATGAGTGCTTCTAGGTTTATAAAGTGTGTTACCGTGGGCGATGGAGCTGTGGGTAAAACTTGTCTTCTCATTTC
GTATACCAGCAACACTTTTCCCACTGATTATGTCCCAACTGTATTTGACAATTTTAGTGCAAATGTGGTTGTCGATGGGAGCACTGTTAATCTGG
GGCTCTGGGATACTGCAGGTCAGGAGGATTACAATAGATTAAGACCTTTGAGCTATCGTGGGGCTGATGTATTTATACTGGCATTTTCTCTCATT
AGCAAGGCGAGCTATGAAAATGTCTCCAAAAAGTGGATTCCTGAATTGAGGCATTATGCTCCTGGAGTTCCAATTATTCTTGTTGGAACAAAGCT
AGATCTCCGAGAGGATAAGCAATTCTTTGTGGACCATCCAGGTGCTGTTCCACTTAGCACTGCTCAGGGTGAGGAGCTGAGAAAGTCGATTGGTG
CTGCTGCTTACATTGAATGTAGTGCAAAAACTCAACAGAACATTAAGGCTGTTTTTGATGCGGCCATTAAGGTGGTCCTACAACCACCCAAGC
GGGCGAATTGGGTTTGGAAGAATGAGTGCTTCTAGGTTTATAAAGTGTGTTACCGTGGGCGATGGAGCTGTGGGTAAAACTTGTCTTCTCATTTC
GTATACCAGCAACACTTTTCCCACTGATTATGTCCCAACTGTATTTGACAATTTTAGTGCAAATGTGGTTGTCGATGGGAGCACTGTTAATCTGG
GGCTCTGGGATACTGCAGGTCAGGAGGATTACAATAGATTAAGACCTTTGAGCTATCGTGGGGCTGATGTATTTATACTGGCATTTTCTCTCATT
AGCAAGGCGAGCTATGAAAATGTCTCCAAAAAGTGGATTCCTGAATTGAGGCATTATGCTCCTGGAGTTCCAATTATTCTTGTTGGAACAAAGCT
AGATCTCCGAGAGGATAAGCAATTCTTTGTGGACCATCCAGGTGCTGTTCCACTTAGCACTGCTCAGGGTGAGGAGCTGAGAAAGTCGATTGGTG
CTGCTGCTTACATTGAATGTAGTGCAAAAACTCAACAGAACATTAAGGCTGTTTTTGATGCGGCCATTAAGGTGGTCCTACAACCACCCAAGC
Unigenes |
Current Unigene builds | |||||
[SGN-E296529] | SGN-U578524 | Tomato 200607 | Build 2 | 40 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T107479 [Download] [View] | Facility Assigned ID: TMECW57TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |