EST details — SGN-E296972
Search information |
Request: 296972 | Match: SGN-E296972 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C83810 | Clone name: cLET-26-D22 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C191072 [TUS-62-A22] | Trace: SGN-T342196 | EST: SGN-E541321 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C191072 [TUS-62-A22] | Trace: SGN-T342199 | EST: SGN-E541324 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E296972 | Length: 373 bp (939 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E296972 [] (trimmed)
AAAAAAGAACTTGGATAATACTCCTACTTGTAAAATCCCATAGTCTTCACATAAAATCATTTAGAAGAGCTTAATTTGATGGGAATTTAAAAGGG
TTGTCTTGAAATACTTCAATTTTTTCTAATCTTGGAAAACTGTATTAAGCTCAAAGGTGACATTTTTATCTTGTCATAAGCAAGAAAGTTCAAAA
TGTTGCCTAAAGAACCATCATTTTGTATATATAATACTGAAGATGGGGTTGATGAGATGAAGGAAAATCAAGATTTGGTTAGGTCTGTGACAATA
GGGGATATTGTATCAGATATAGGTAGTAGTGATTTCAGTTTTGGGAAAAAGGGGATGGGGTTGATTGAAGAAGATGAGAATGAAGATG
TTGTCTTGAAATACTTCAATTTTTTCTAATCTTGGAAAACTGTATTAAGCTCAAAGGTGACATTTTTATCTTGTCATAAGCAAGAAAGTTCAAAA
TGTTGCCTAAAGAACCATCATTTTGTATATATAATACTGAAGATGGGGTTGATGAGATGAAGGAAAATCAAGATTTGGTTAGGTCTGTGACAATA
GGGGATATTGTATCAGATATAGGTAGTAGTGATTTCAGTTTTGGGAAAAAGGGGATGGGGTTGATTGAAGAAGATGAGAATGAAGATG
Unigenes |
Current Unigene builds | |||||
[SGN-E296972] | SGN-U573050 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T109024 [Download] [View] | Facility Assigned ID: TMEDZ23TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.919 | Expected Error Rate: 0.0013 | Quality Trim Threshold: 14.5 |