EST details — SGN-E297354
Search information |
Request: 297354 | Match: SGN-E297354 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C88929 | Clone name: cLEW-10-M19 |
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Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E297354 | Length: 490 bp (957 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E297354 [] (trimmed)
GCTTAAGCAAATAATTGAGCAATGGTGGAAGTCCATCCAGCAATCATCCAAGATGTCGAACACAGGCCAGATCTCACCAAAAGTACTGAAGCAGA
GGGCATTCCAGTGATTGATCTCTCAATACTGAATTCTCCAGACACATCGACTGACGCGGAGTTATCAAGTCTAGTTGGTGAAATAAGAAATGCAT
GCAAGGAGTGGGGATTCTTCCAAGTGATCAATCATGGGGTGTGCTTAGAGTGCAGGGAAAAGATAGAATTGGCATCAAGAAAGTTCTTTGCTTTA
CCTAAAGAGGAAAAGATGAAAGTGAAAAGAAATGAGGTGAACTTCATTGGATATTATGATGCTGAGCTAACCAAAAAGATCAGGGACTGGAAAGA
AGTCTTTGATTTTACTGTTGAGAAGACAGCTATGGTCCCACTTTCTGAAGATCCTAATGACAAGGACCTCAGGGACTGTCAGAACCAATGGCCTC
AGTACCCTTCAGGAT
GGGCATTCCAGTGATTGATCTCTCAATACTGAATTCTCCAGACACATCGACTGACGCGGAGTTATCAAGTCTAGTTGGTGAAATAAGAAATGCAT
GCAAGGAGTGGGGATTCTTCCAAGTGATCAATCATGGGGTGTGCTTAGAGTGCAGGGAAAAGATAGAATTGGCATCAAGAAAGTTCTTTGCTTTA
CCTAAAGAGGAAAAGATGAAAGTGAAAAGAAATGAGGTGAACTTCATTGGATATTATGATGCTGAGCTAACCAAAAAGATCAGGGACTGGAAAGA
AGTCTTTGATTTTACTGTTGAGAAGACAGCTATGGTCCCACTTTCTGAAGATCCTAATGACAAGGACCTCAGGGACTGTCAGAACCAATGGCCTC
AGTACCCTTCAGGAT
Unigenes |
Current Unigene builds | |||||
[SGN-E297354] | SGN-U575358 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T112732 [Download] [View] | Facility Assigned ID: TRDBK82TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.954 | Expected Error Rate: 0.0148 | Quality Trim Threshold: 14.5 |