EST details — SGN-E297887
Search information |
Request: 297887 | Match: SGN-E297887 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C85164 | Clone name: cLET-38-E4 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C182156 is on microarray TOM1: SGN-S1-1-7.2.10.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C182156 [TUS-38-N10] | Trace: SGN-T187803 | EST: SGN-E374533 | Direction: 3' | Facility: INRA |
Clone: SGN-C182156 [TUS-38-N10] | Trace: SGN-T187804 | EST: SGN-E374534 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E297887 | Length: 274 bp (897 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E297887 [] (trimmed)
GATTCGTGAAACTGAGGTTGTCAACAAAGGCCATAAAGACCATTGAGAAAAATGGACTTGATGCTGTAGCCAAGAAAGCTGGGATTGATCTCAGC
AAGAAGTAGAACCTGGAACCTGATAGCATATTTGTTTGGACACTAATTTTGATGCCCTCAAAAACCATAACTTTATTTTTTGGCATTGCTTGTTG
ATTTGTAGTTATATGTTTTCATGATATTACTCTCCAAGCATATCTTGATCACCTACTTTCAATGAATATCAACATCATTCTCTC
AAGAAGTAGAACCTGGAACCTGATAGCATATTTGTTTGGACACTAATTTTGATGCCCTCAAAAACCATAACTTTATTTTTTGGCATTGCTTGTTG
ATTTGTAGTTATATGTTTTCATGATATTACTCTCCAAGCATATCTTGATCACCTACTTTCAATGAATATCAACATCATTCTCTC
Unigenes |
Current Unigene builds | |||||
[SGN-E297887] | SGN-U582646 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T109966 [Download] [View] | Facility Assigned ID: TMEFT26TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.908 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |