EST details — SGN-E298016

Search information 
Request: 298016Match: SGN-E298016
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C89196Clone name: cLEW-12-C15
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E298016Length: 513 bp (901 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E298016 [] (trimmed) GGAAGGTTGTGCAGGAGAAGAAGGTGTTGGAAGTTGTTGTCGAGAAGGGTATGCAGAATGGACAGAAGATCACATTCCCGGGCGAGGCTGATGAA
GCACCTGATACCGTCACTGGGGACATAGTTTTTGTCTTGCAACAGAAGGAACATCCCAAGTTTAAGCGGAAGGGAGATGATCTCTTTGTAGAGCA
CACCTTGAGCTTAACCGAGGCCCTGTGTGGTTTCCAGTTCATCTTGACTCACCTAGATACCAGGCAGCTGATCATCAAGTCCCAACCCGGAGAAG
TTGTCAAACCTGATCAATTTAAGGCCATAAATGATGAAGGAATGCCGATGTACCAAAGGCCATTTATGAGAGGAAAACTATACATTCACTTCACC
GTAGAATTCCCCGACACATTATCCCTCGAGCAATGCAAGAACCTTGAAGCAGTATTGCCACCAAAACCCAAAACCCAAATGACTGATATGGAATT
GGACGAGTGCGAGGAGACCACGTTACATGATGTTAACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E298016] SGN-U578090 Tomato 200607 Build 2 217 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T113010 [Download] [View] Facility Assigned ID: TRDBS20TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0087 Quality Trim Threshold: 14.5