Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E298087

Search information 
Request: 298087Match: SGN-E298087
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C89259Clone name: cLEW-12-K9
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E298087Length: 573 bp (916 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E298087 [] (trimmed) ACGAGGCTCGAGCTCCTTTAAACTTTTAGAAGCTGAAAATGACGCTTGGAGAAAGGCAAGGATATGAGAAAAATGACTCAAAGTACTGCGGAGTT
GAAACGGAGTTCAATGATGACATGCCTCAACTTCTCTCCCTCAACATTCATGGAGGATTCGACTTTGTTGTCGCACCATTGATGGATCCTGCTTA
CAGGCCTAGTTTACTGGTGAGTAGCAATGGTGGATCTGGGGTTCTTCCATTCGCTGGGTCAGACTTGGTGCTAAGCCCTTCCCAATGGAGTAGTC
ATGTTGTTGGTAAAATTAGCTCATGGCTTGACTTGGATTCTGAGGATGAAATGTTTCGGAGGGATTCTGAGATTACTTTGAAACAAGAAATAGCC
TGGGCTTCTCACCTTTCACTGCAGGCCTGTCTTCTTCCTGCACCCAAGGGAGTGACCTGTGCTAATTATGCTAGATGTGTGAATCAAATTCTACA
GAATCTAAGCAATATGCAGTTGTGGCTAAGAATTCCATTGGAGAAATCTGATGATGATGAAGATAGAAGTCCTAACTCTATGGGTGAAGAACATA
GAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E298087] SGN-U566475 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T113081 [Download] [View] Facility Assigned ID: TRDBS65TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0101 Quality Trim Threshold: 20.5