EST details — SGN-E298239
Search information |
Request: 298239 | Match: SGN-E298239 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C89596 | Clone name: cLEW-18-C2 |
| ||
Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
See unigene SGN-U568655 for alternative clones/ESTs which are mapped
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E298239 | Length: 513 bp (951 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E298239 [] (trimmed)
GGTTTGTTACTGGTGCTCCTCGGCTCCCCGCAGCTGTGGAAGCGTGAGACGCTAGGGGATCACATAAAATTCGATCATGGATTCACATCCAAGAG
TCCTCCTATTATTCATTTACTAGAGATTATGGGAGAGTTCACACCTGAGCAGCAACGAGCATTCTGCCAGTTTGTTACTGGTGCTCCTCGGCTCC
CCGCAGGTGGTCTTGCTTCTCTGAATCCTAAGTTGACAATTGTGAGGAAGCATTCATCTAGTGCTGGCAATGCAGCACAGAACAGTAATGCCCCA
TCAGAATCTGCAGATGAAGACCTACCCAGTGTGATGACATGTGCTAATTACTTGAAACTCCCTCCCTATTCTACTAAGGAGATCATGTCCAAGAA
ATTACTCTATGCCATTAATGAAGGTCAAGGATCGTTTGATTTGTCATAAGTCGGAGTAACTAATAGACTTGTTTATACAACTCGAGAATTGGTGC
TTCTGATCCTTGATAATGGTGCCGTCAAACCACCCTCT
TCCTCCTATTATTCATTTACTAGAGATTATGGGAGAGTTCACACCTGAGCAGCAACGAGCATTCTGCCAGTTTGTTACTGGTGCTCCTCGGCTCC
CCGCAGGTGGTCTTGCTTCTCTGAATCCTAAGTTGACAATTGTGAGGAAGCATTCATCTAGTGCTGGCAATGCAGCACAGAACAGTAATGCCCCA
TCAGAATCTGCAGATGAAGACCTACCCAGTGTGATGACATGTGCTAATTACTTGAAACTCCCTCCCTATTCTACTAAGGAGATCATGTCCAAGAA
ATTACTCTATGCCATTAATGAAGGTCAAGGATCGTTTGATTTGTCATAAGTCGGAGTAACTAATAGACTTGTTTATACAACTCGAGAATTGGTGC
TTCTGATCCTTGATAATGGTGCCGTCAAACCACCCTCT
Unigenes |
Current Unigene builds | |||||
[SGN-E298239] | SGN-U568655 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T113419 [Download] [View] | Facility Assigned ID: TRDCR13TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.981 | Expected Error Rate: 0.0097 | Quality Trim Threshold: 14.5 |