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EST details — SGN-E298268

Search information 
Request: 298268Match: SGN-E298268
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C89642Clone name: cLEW-18-M6
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C191679 [TUS-63-K5] Trace: SGN-T343239 EST: SGN-E542364 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C191679 [TUS-63-K5] Trace: SGN-T349577 EST: SGN-E548702 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E298268Length: 559 bp (979 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E298268 [] (trimmed) GGTACTTTCACACATAGCTTTTTCCTTGTACCAAAATTGGAAAATCTCAAATTGGGGGCCAATGATCTTCTCAAAGGAGTTTTACCAAAGATCCA
CCCGAGCAACACTACTCTATTGGAGTTGGATATTTCTAACACAAGAATCTCTGGTGAGCTGACTGATTCAATTGGCACCTTCAGTTCCTTGAATA
TCTTGAACCTCAAAGGATGTCGATTCTCTGGTTCCATTCCTGATTCCATTGGCAATCTTACACAAATTAGGTATTTGGATTTCAGTTATAATCAT
TTCACCGGCCATATTCCTTCCACAATCTCTCAATTGAAGCACCTCACATATCTAAGTCTTTCATCCAACTCCTTTTCAGGTGAACTTCCCGATAT
TTTTTCTAACCTCCAAGAGTTACGTTATTTATATCTTTCTAACAACAGCTTCATCGGTTCGTTTCCTTCTAAAATTGTAAGCTTGACACATCTTG
AATGCTTAGACTTGTCCTACAACTTAATGAATGGGACCATACCATCTTCGGTGTTTAGCCTCCCTTTGTTAGGTCTGTTGTGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E298268] SGN-U574729 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T113448 [Download] [View] Facility Assigned ID: TRDCR75TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5