EST details — SGN-E298409
| Search information |
| Request: 298409 | Match: SGN-E298409 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C85980 | Clone name: cLET-41-J8 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C191215 [TUS-62-G21] | Trace: SGN-T342442 | EST: SGN-E541567 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C191215 [TUS-62-G21] | Trace: SGN-T342445 | EST: SGN-E541570 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E298409 | Length: 630 bp (969 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E298409 [] (trimmed)
GTTCGAGTAGTATTCAAAGATCCATGCATTCGACTTGCCAGAGAAGTGACAACGACACTAAAGGAACTAGGCGATAGCATACGAAATCGTCGTAA
ATACTGCCCAGAAATCCCATCTAATCATGTCAATGAAGCCTTACAAGACCTCATCGACGCATTAAAATCCCAGCCAAGACTCTTTCTCGGCACAA
ATAGTAATACAAACATACTATTAGCCTTAGCCACATTGGCCACTAGGCAAAAATCAGGTAAAGATTTTGTAGCCTCTTTATCAAGTGTAAATAAT
GACGATCCTGCTCGTCTTGGACTTAGCCATGATAAAAAGAGTTTGAGGCCTACATTAAGCAAGATAGGCATGACTAGCTTGGAATTTTTGGAGGC
CTTACCATTTGCAGCTTTTGCATCTTTGTTAGTTGAGATTGTTGCAAGACTTGATCTTGTTATTGAACAAGTAGTGGAATTGGGAAGAGTTGCGC
AATTTAAGGAATATAGTCATGATGATGTGGTTATTAATGTAAGTTGTGATAATAATCCTAGAGTGGGAAATGAGTTCCCCTCCTCCCATACAGCA
ACAGATTGAGTACTCTAGACTTTAGTGGCTACATTTTTTCAGTAGTCAAATGATATATAT
ATACTGCCCAGAAATCCCATCTAATCATGTCAATGAAGCCTTACAAGACCTCATCGACGCATTAAAATCCCAGCCAAGACTCTTTCTCGGCACAA
ATAGTAATACAAACATACTATTAGCCTTAGCCACATTGGCCACTAGGCAAAAATCAGGTAAAGATTTTGTAGCCTCTTTATCAAGTGTAAATAAT
GACGATCCTGCTCGTCTTGGACTTAGCCATGATAAAAAGAGTTTGAGGCCTACATTAAGCAAGATAGGCATGACTAGCTTGGAATTTTTGGAGGC
CTTACCATTTGCAGCTTTTGCATCTTTGTTAGTTGAGATTGTTGCAAGACTTGATCTTGTTATTGAACAAGTAGTGGAATTGGGAAGAGTTGCGC
AATTTAAGGAATATAGTCATGATGATGTGGTTATTAATGTAAGTTGTGATAATAATCCTAGAGTGGGAAATGAGTTCCCCTCCTCCCATACAGCA
ACAGATTGAGTACTCTAGACTTTAGTGGCTACATTTTTTCAGTAGTCAAATGATATATAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E298409] | SGN-U571032 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T110446 [Download] [View] | Facility Assigned ID: TMEGH52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0158 | Quality Trim Threshold: 12.5 |
Working
