EST details — SGN-E299612
Search information |
Request: 299612 | Match: SGN-E299612 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C90229 | Clone name: cLEW-20-G10 |
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Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E299612 | Length: 581 bp (963 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E299612 [] (trimmed)
GATTGGACATCGGTGAGGTGGAAAATCTACAGAATGGGGACATCAGTATGGTGCTTGGTGATGAGGAAGGACAAGAAGGAAATGATGAGGAGGAG
GGAGGATGGGATCTTGAGGATCTGGATCTGCCTTCTGATGCAGACACACCTAAGACTACTTCCAATGCTCGTTCTTCTGTGTTTGTCACCCCAAC
ACCTGGCATGCCTGTCAGCCAGATTTGGGTCCAAAAATCATCTCTAGCTGCTGAACATGCAGCTGCTGGAAATTTTGATACTGCTATGCGGTTGT
TGAGTAGACAACTAGGGATTAGGAACTTCTCTCCTTTAAAATCACTGTTTATTGATCTTCATGTGGGTAGCCACACTCATCTGCTTGCCTTTTCC
TCGGCGCCGGTCATCTCCGTGGCAATTGAGAGAGGTTGGAGTGAGTCAGCTAGTCCTAATGTTCGAGGTCCACCTGCTCTTATATTCAGTTTTGC
TCAGTTGGAGGAAAAACTTAAAGCTTCTTATAAAGCGACTACTGGTGGAAAATTTTCTGATGCACTTAGACTATTCCTGAGCATGCTTCACACCA
TTCCTCTGATT
GGAGGATGGGATCTTGAGGATCTGGATCTGCCTTCTGATGCAGACACACCTAAGACTACTTCCAATGCTCGTTCTTCTGTGTTTGTCACCCCAAC
ACCTGGCATGCCTGTCAGCCAGATTTGGGTCCAAAAATCATCTCTAGCTGCTGAACATGCAGCTGCTGGAAATTTTGATACTGCTATGCGGTTGT
TGAGTAGACAACTAGGGATTAGGAACTTCTCTCCTTTAAAATCACTGTTTATTGATCTTCATGTGGGTAGCCACACTCATCTGCTTGCCTTTTCC
TCGGCGCCGGTCATCTCCGTGGCAATTGAGAGAGGTTGGAGTGAGTCAGCTAGTCCTAATGTTCGAGGTCCACCTGCTCTTATATTCAGTTTTGC
TCAGTTGGAGGAAAAACTTAAAGCTTCTTATAAAGCGACTACTGGTGGAAAATTTTCTGATGCACTTAGACTATTCCTGAGCATGCTTCACACCA
TTCCTCTGATT
Unigenes |
Current Unigene builds | |||||
[SGN-E299612] | SGN-U564467 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T113873 [Download] [View] | Facility Assigned ID: TRDCZ41THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 14.5 |