EST details — SGN-E299865

Search information 
Request: 299865Match: SGN-E299865
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C90066Clone name: cLEW-1-I20
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C191330 [TUS-62-L16] Trace: SGN-T342642 EST: SGN-E541767 Direction: 5' Facility: INRA (MWG)
Clone: SGN-C191330 [TUS-62-L16] Trace: SGN-T349478 EST: SGN-E548603 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E299865Length: 594 bp (877 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E299865 [] (trimmed) TTACAGAAAGATGAAACAAGAAATTTATGGTGGTACCAATAACAAATGGATAATTACAGCACAACAACAAAGAAGTCAAAAGTGTACATTGTTTC
AAGCTAGAAATAGCTTCATTTTGCTATTATTACTTCTTATTAAACAACATAATCGATAGATAGACAGGAAACAAACTCAAGCATTTTATCACACA
GTAAAAATAAAAACGAATATCAAAACTAAGGAACAACTTTGTAAGCTTTCACCTTATCAATCCAGGAAATGAAGGCTTTTTGTGAGTTCCGGAAT
CCCAAGAAACCGTGCTCCTTGCTCTTGTTCATAGTATCCAAAGCGCAATCTCCAGAAAGGATAAGATCAACAAACCACCAAACTCCAACCTCCTC
CAATTTAGTAGGCACCAATCCATTCTCCTTCACAATCTCATCCCAAACCGCGCCTTTGTCTTTCATCATCTCTACCAATGTGCATCTCTTCCCTT
CATCAAACTCCGCAGCTTCCAGTCCAAATTGCTCACCCAAAACCTTCCAGAAATGCTTCCACTTGAAAACATCCCCATTGCTCACATTAAACGCC
TCATTCTTGGCATAAAGATCCACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E299865] SGN-U572979 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T112095 [Download] [View] Facility Assigned ID: TRDAB58THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.936 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5