EST details — SGN-E300054

Search information 
Request: 300054Match: SGN-E300054
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C89026Clone name: cLEW-11-G19
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E300054Length: 502 bp (906 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E300054 [] (trimmed) CTACTGCGAAGCCGGCGGCGAAGGAAACTGAGATAATGCCTGGGATGAAAGGGCCTTCCGACCATTCGCGAGAACCCCCTCGCCATCCTTCTCTT
AAAATTAATGCCAAGGAACCCTATAATGCTGAGCCAACTCGTTCAGCTCTGATTTCATCTCATGTCACTCCTGTTGATTTCTTTTACAAGAGAAA
CCACGGACCCATACCAGTAGTGGATGACATAGAGAGGTATTCCGTTTCTCTGAGTGGTCTTATAAAAAATTCCAAAGACTTGTTTATGAAGGATA
TTTGAAAGCGTCCAAAACATACGGATACTGCCACTTTACAGCGTGCTGGTAACACAAGAACTGCTATGAGTAAGAGTCGAACAGCGAAAGGAGTG
GGTAGGGATATTGCTGCTTTAGGAAATGCTGTTTGGGGTGGAGCCAAATTGGCAGATGTTCTAGAATTAGTTGGAATACCTTATGTGGCAAGTAT
CACACAATCTGGAGGAAAACATGTGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E300054] SGN-U581608 Tomato 200607 Build 2 70 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T112894 [Download] [View] Facility Assigned ID: TRDBO46TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.984 Expected Error Rate: 0.0287 Quality Trim Threshold: 14.5