EST details — SGN-E300320

Search information 
Request: 300320Match: SGN-E300320
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C89553Clone name: cLEW-17-M8
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E300320Length: 587 bp (834 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E300320 [] (trimmed) GCAACAATGGACAAGCGTGCATCTCTCCTGATTATATAATTACGACCAAAGAAAGTGTGCCAAAATTGCTAGATGCTATGAAACAGGAATTGGAG
AAATTCTATGGAAAGGATCCACTAAAATCAGGAGATCTATCTCGCATTGTGAATGCTAACCACTTTCAACGACTATCAAAGTTACTGGATGATAA
TAAGGTTGTCGATAAGGTAGTTCATGGAGGTCAGAGAGATGAAAATAATTTAAAGATCTCTCCTACAATTCTTCTGGATGTCCCAGAAGATTCTT
TAATCATGAAGGAGGAAATATTTGGTCCTCTACTTCCTATTATCACGGTCAATAAAGTGGAGGATTCTATACAATTCATTAAAGCCAGAGAAAAG
CCACTTGCAGCATATCTGTTCACAAGCAACAAGAAACTGGAGGAGGAGTTTGTCATGAATATATCAGCAGGGGGTCTGCTTATCAATGACACCAC
TTTACAAGTTGCGCTTTCTACTCTTCCATTTGGAGGAGTAGGGGAAAGTGGAATGGGTTCATGTCATGGCAAATTTTCGTTTGATACTTTCAGCC
ATAAGAAGGCAGTTCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E300320] SGN-U579227 Tomato 200607 Build 2 59 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T113368 [Download] [View] Facility Assigned ID: TRDCN76TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5