EST details — SGN-E300645
Search information |
Request: 300645 | Match: SGN-E300645 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C87289 | Clone name: cLET-45-N9 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C180054 [TUS-33-F20] | Trace: SGN-T186895 | EST: SGN-E374281 | Direction: 3' | Facility: INRA |
Clone: SGN-C180054 [TUS-33-F20] | Trace: SGN-T186896 | EST: SGN-E374282 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E300645 | Length: 511 bp (871 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E300645 [] (trimmed)
GAAACAGAGTCATCAAAATTTGGGGAAAATTCTTACAAGAGAATCGAATAGATTTTGATTTGAGGAAAAAAAGGGGTGGTGTTGAAGTGGATTTG
TGATGGTAAGGAGTGTTTGGTTGTGAGTAAAATTCGGTTTTTCTTTTTTGGGTTTTGGGTGGTTGGAGTAAAGAGCGAAAGAGAAGGAAAATTGC
AGGTATGAATAGAGGAGGAATTGGAATTGGAGGGCCAATGCGAAAGTCTTTTAAGGACTCTCTTAAAGTTCTTGAAGCTGATATTCAGCATGCTA
ATACTCTGGCATCTGACTTTCCCCGAGAGTACGATGGGGCCTGCCTACAGATGAGAATGTCCTACAGTTCAGCAGCGCACCTGTTCCTTTTCTTA
GTCCAGTGGACTGATTGCCACCTTGCTGGTGCACTTGGATTGTTGAGAATTCTTATTTACAAGGTTTATGTTGATGGCACCACAACCATGTCAGT
TCATGAAAGGAAAGCAAGCATTAGGGAGTTCTATGC
TGATGGTAAGGAGTGTTTGGTTGTGAGTAAAATTCGGTTTTTCTTTTTTGGGTTTTGGGTGGTTGGAGTAAAGAGCGAAAGAGAAGGAAAATTGC
AGGTATGAATAGAGGAGGAATTGGAATTGGAGGGCCAATGCGAAAGTCTTTTAAGGACTCTCTTAAAGTTCTTGAAGCTGATATTCAGCATGCTA
ATACTCTGGCATCTGACTTTCCCCGAGAGTACGATGGGGCCTGCCTACAGATGAGAATGTCCTACAGTTCAGCAGCGCACCTGTTCCTTTTCTTA
GTCCAGTGGACTGATTGCCACCTTGCTGGTGCACTTGGATTGTTGAGAATTCTTATTTACAAGGTTTATGTTGATGGCACCACAACCATGTCAGT
TCATGAAAGGAAAGCAAGCATTAGGGAGTTCTATGC
Unigenes |
Current Unigene builds | |||||
[SGN-E300645] | SGN-U568639 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T111817 [Download] [View] | Facility Assigned ID: TMEGW77TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.956 | Expected Error Rate: 0.0123 | Quality Trim Threshold: 14.5 |