EST details — SGN-E300729

Search information 
Request: 300729Match: SGN-E300729
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C91812Clone name: cLEW-8-J13
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E300729Length: 592 bp (907 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E300729 [] (trimmed) TGAAGCTCCTCAGAACCCTCTCTGCACCCAAAAATCTACTCATTCGAAGAATAGGGCATCGATACTTTGCGGCCACACCGGAAGAGTACGCCAAC
AGAAACTATGCCAACAATGAGTCCGAATATACCACTGTTATTAACTCTATTACTGCTCAGAGAAAGAATTTCTTGTTGAGGGATGTTTATGATGA
CATGTTGCTCGATGGAATAAAGCCAGAGAGAGATACATTTCATTCACTTCTTATCGGAACCATGAAAGGTGCTCGCTTGCAAGATGCTTTCTTTT
TCCGTGAAGAGATGAAAGCTATGGGCTTCGTACCTGATGTTTCTTTGTACAATTTCTTGATATCTACCTGTGGAAAATGCAAAAATTCTGAACAA
GCAATAAGCATCTTGGAAGAAATGAAGAGATTTGAGGTCAAGCCTACTGGACAAACCTATATCTGTCTCCTCAATGCATTTGCAATGACTGGTCG
GGTAGATAGAGTGTATGCAATTGTTCGGGACATGACTGCTGCTGGTCTTGGTCTGAATAAATTCTGCTATGCTGGACTTATAGCTGCTCACAAGA
ATAAAGAACCTGTCACAGATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E300729] SGN-U564997 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T112334 [Download] [View] Facility Assigned ID: TRDBE55TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5