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EST details — SGN-E300882

Search information 
Request: 300882Match: SGN-E300882
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C91658Clone name: cLEW-8-B12
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E300882Length: 549 bp (913 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E300882 [] (trimmed) GAAGACAGGTAAAGATTCTGTCTTTAGCATTTTCTGTTTGGTTTCATCACTATCTCTTGTTATTTGCTCTGTCACTAAATTGTGTTTTCTTTTGA
AAAAAAAACAAAAGACTCCAACTTTTCTTGAATCTGAAGGGACAGTGATTCTGAATGTTTGAGTTTTTCTAAGCTTCTGAGATGGTGAAAGGTAG
ATAAAAAAAGTTGGTTTTTTTTTAATGAGTTGTTGAGATGATTTGTTCATTTGGTGAAGTTGAGTCACAAAGATGGGTTTCTGGGCATACCCATC
TGAAAAGTTCTTGGATTCAATATAGAAAAGATGGTGTTTTTACATATCCTCCTCCTCTGTTTCCCCCATCTCCTCCTCCATTTGGTGGAAGTTCT
AGTTTTCATAAGGAACCAAACTCATCTTCTTCATCCCCATCTGGAAACAAGATTAGTCCAGCTGTTCTTTTCATTATAGTTATATTAGCTGTCCT
GTTTTTCATATCTGGTCTGCTTCATTTGCTAGTTAGGTTTCTTATCAAACACCCTTCTTTTTCAGCATCATCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E300882] SGN-U574187 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T112487 [Download] [View] Facility Assigned ID: TRDBF06TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.924 Expected Error Rate: 0.0064 Quality Trim Threshold: 14.5