EST details — SGN-E300999

Search information 
Request: 300999Match: SGN-E300999
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C90347Clone name: cLEW-22-C5
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C191782 [TUS-63-O12] Trace: SGN-T343416 EST: SGN-E542541 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C191782 [TUS-63-O12] Trace: SGN-T343419 EST: SGN-E542544 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E300999Length: 497 bp (541 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E300999 [] (trimmed) GCTCGGTTGGTGTCTGTTCTGATGGGAGGTAACATTTAGTGGACGCAAGCTAACCGAGACATCACTTTTGTTAAAGGGAAGAGTACTATATCCTA
TTGATGAATAATAGAACAAGATATATCAAGAAAATGGATACAAATGAATCAAAACATGATAGAAAAAGTGAGTTAAAAGCCTTTGATGACACAAA
ATCTGGTGTCAAAGGACTTGTTGATGCAGGAGTAAGTAAAGTCCCTCAGATATTCATTTCACCTCCAGATACATACTCAAATTCCAACACAGGAC
AGTTCATTTTTCCAGTTATAGACCTCCAAGATATGGATAGTCACGATCAAATCAATCGAAAAAAAGTCATTGAGAAAGTCCGCGATGCATCAGAG
ACATGGGGTTTCTTTCAAGTGATCAATCATGGCGTTCCGTGTGATGTTATGGAAGAAATGATACGAGGTGTTTGTAGTTTTCATGAACAAGATAC
TGATATCAAGAAGCAATGGTAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E300999] SGN-U580554 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T113897 [Download] [View] Facility Assigned ID: TRDDG15TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0013 Quality Trim Threshold: 14.5