EST details — SGN-E301306
Search information |
Request: 301306 | Match: SGN-E301306 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C90919 | Clone name: cLEW-24-N2 |
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Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E301306 | Length: 385 bp (852 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E301306 [] (trimmed)
ACCCTAAGGGAAACAATCGCTAAATCTTCAAATAATCACTTTTCTCTTTCCCAATTTTGATCAATTACAGCTATGGCGACCAGTGGAAACAAGAA
TATGAACGCCAAATTGGTGCTCCTTGGGGATGTTGGAGCTGGAAAATCTACTCTAGTTCTGCGTTTTGTTAAAGGACAATTTATTGAATTTCAGG
AATCAACCATACGTGCTGCATTTTTCTCTCAAACAGTAGCAGTAAATGATGCAACTGTCAAATTTGAAATATGGGATACAGCACGCCAAGAGAGA
TACCACAGTCTAGCTCCAATGTATTACAAAGGTGCTGCAGCTGCTATTATTGTTTATGATATAACAAATCAAGCATCATTTGATAGAGCAAAAAA
ATGGG
TATGAACGCCAAATTGGTGCTCCTTGGGGATGTTGGAGCTGGAAAATCTACTCTAGTTCTGCGTTTTGTTAAAGGACAATTTATTGAATTTCAGG
AATCAACCATACGTGCTGCATTTTTCTCTCAAACAGTAGCAGTAAATGATGCAACTGTCAAATTTGAAATATGGGATACAGCACGCCAAGAGAGA
TACCACAGTCTAGCTCCAATGTATTACAAAGGTGCTGCAGCTGCTATTATTGTTTATGATATAACAAATCAAGCATCATTTGATAGAGCAAAAAA
ATGGG
Unigenes |
Current Unigene builds | |||||
[SGN-E301306] | SGN-U565736 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T114429 [Download] [View] | Facility Assigned ID: TRDDR73TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.952 | Expected Error Rate: 0.0164 | Quality Trim Threshold: 14.5 |