EST details — SGN-E301462
Search information |
Request: 301462 | Match: SGN-E301462 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C95100 | Clone name: cLEX-8-G14 |
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Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C192297 [TUS-65-D23] | Trace: SGN-T344307 | EST: SGN-E543432 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C192297 [TUS-65-D23] | Trace: SGN-T349752 | EST: SGN-E548877 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E301462 | Length: 453 bp (735 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E301462 [] (trimmed)
GGGCAGACATCAAATTCCCCGTCACGCAGTAGAGTACAGCCAAACTAGTTTCTTGTTGATGACATAGTTTGCTCAATCCTAGAGCTAGATTCACA
CACTCCGCTACTATAAAATTTGTTCTTCCCCCTCGTCTTGGTTGCCTTTATCGTGCGCCCATCTCTCTTGGGAACTTGAGTTTTGCTGCTGAGAT
TTGACCATGGGTAATGCTTCTTCGATGTTGACTCAATATGATATTGAGGATGTTCAAGACCACTGCGACCATCTCTTTGCACAGCAGGAAATAGT
GTCACTGTATCAGAGGTTCTGCCAACTTGATCGGAATTCAAAGGGTTTTATATCAGCTGATGAGTTTCTCTCTGTGCCAGAATTCGCAATGAATC
CACTTTCTCAGAGATTGCTTAAGATGGTGGATGGCTTGAACTTCAAGGACTTTGTGGCATTTTTATCAACTTT
CACTCCGCTACTATAAAATTTGTTCTTCCCCCTCGTCTTGGTTGCCTTTATCGTGCGCCCATCTCTCTTGGGAACTTGAGTTTTGCTGCTGAGAT
TTGACCATGGGTAATGCTTCTTCGATGTTGACTCAATATGATATTGAGGATGTTCAAGACCACTGCGACCATCTCTTTGCACAGCAGGAAATAGT
GTCACTGTATCAGAGGTTCTGCCAACTTGATCGGAATTCAAAGGGTTTTATATCAGCTGATGAGTTTCTCTCTGTGCCAGAATTCGCAATGAATC
CACTTTCTCAGAGATTGCTTAAGATGGTGGATGGCTTGAACTTCAAGGACTTTGTGGCATTTTTATCAACTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E301462] | SGN-U581483 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T115989 [Download] [View] | Facility Assigned ID: TRXBD43TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |