EST details — SGN-E301546
| Search information |
| Request: 301546 | Match: SGN-E301546 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C90747 | Clone name: cLEW-23-O8 |
| ||
| Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E301546 | Length: 339 bp (932 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E301546 [] (trimmed)
TTGCACGAGGGAGTTTTGAGATATTTGACAACGTTGAAACCGAGAGGACCTTGAGTCAGTGAAATATTGAAGCAGAAAATTGTGATTTTCGATTA
TGGATTAAGGAATTTTCGTCTGGAATTGATAGGAATTGGAATAATTGGAGGGATGTTGAGGTTCACGAGGTGGTGAAGGTAGCAAAGTAGTTGCC
GGGGCTATGGATTCCGGTGATTGGAAGACTAAACTTTTGCGTGATTTGCGTCAAAGGATTGGCAACATTATGTAAGTTTTTTATATATTTGTTTT
TGTGACTTGTTCTTTAATTTTTAAAAGGATTTTGGAATTTTGAATTTTAGGTTT
TGGATTAAGGAATTTTCGTCTGGAATTGATAGGAATTGGAATAATTGGAGGGATGTTGAGGTTCACGAGGTGGTGAAGGTAGCAAAGTAGTTGCC
GGGGCTATGGATTCCGGTGATTGGAAGACTAAACTTTTGCGTGATTTGCGTCAAAGGATTGGCAACATTATGTAAGTTTTTTATATATTTGTTTT
TGTGACTTGTTCTTTAATTTTTAAAAGGATTTTGGAATTTTGAATTTTAGGTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E301546] | SGN-U565361 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T114183 [Download] [View] | Facility Assigned ID: TRDDL88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.909 | Expected Error Rate: 0.0208 | Quality Trim Threshold: 14.5 |
Working
