EST details — SGN-E301733
Search information |
Request: 301733 | Match: SGN-E301733 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C95205 | Clone name: cLEX-9-P8 |
| ||
Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C192318 [TUS-65-E20] | Trace: SGN-T344343 | EST: SGN-E543468 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C192318 [TUS-65-E20] | Trace: SGN-T349758 | EST: SGN-E548883 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E301733 | Length: 412 bp (775 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E301733 [] (trimmed)
GCAGATATGCCCAGATCAAGATTCAAGAGGAGGAAGACTCTGAACAAAAGTCCTCTGAGCTCAATGCCTAGGAAAGTTGTGGAAGAAAACTCTTG
TACAACAGAGAACAATTACATGGCTTTGGTGCCTGTTAAGCCTATTGAAGTCCGGGAGTCAAAGTCTCGCTGGACACTGCTTCGACGAGTGTTTC
TTCAGAACTTAGTGGCACCTGATAAATTTCCCGCGAAAAGGTCCTCTGTGATTCATTGGGTTTGGAAGCGACCAAGTCGGCAATCTTTTGCAGCT
ATCTACCCTGATCATAAACAGAGTGTATCTGACAAGGATGAGCCTCATCATACAAACTTGGATGCAGAGAAGGGGGCAATTATTCCTGTTGGAAG
TGATGCTAATCCAATTTCAAATGAATTTATTA
TACAACAGAGAACAATTACATGGCTTTGGTGCCTGTTAAGCCTATTGAAGTCCGGGAGTCAAAGTCTCGCTGGACACTGCTTCGACGAGTGTTTC
TTCAGAACTTAGTGGCACCTGATAAATTTCCCGCGAAAAGGTCCTCTGTGATTCATTGGGTTTGGAAGCGACCAAGTCGGCAATCTTTTGCAGCT
ATCTACCCTGATCATAAACAGAGTGTATCTGACAAGGATGAGCCTCATCATACAAACTTGGATGCAGAGAAGGGGGCAATTATTCCTGTTGGAAG
TGATGCTAATCCAATTTCAAATGAATTTATTA
Unigenes |
Current Unigene builds | |||||
[SGN-E301733] | SGN-U563034 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T116518 [Download] [View] | Facility Assigned ID: TRXBJ88TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0129 | Quality Trim Threshold: 14.5 |