EST details — SGN-E301844

Search information 
Request: 301844Match: SGN-E301844
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C90977Clone name: cLEW-25-C3
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E301844Length: 629 bp (936 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E301844 [] (trimmed) GCTAACTGTGATCACCCCGGGCCTTGTCTCCTCATAACGATATCCCTTCTCCACGAGAAAGCTTCTTATAGCCATTGGAAGTGCAGCTTGTCCCC
GGCTATGAATACCTTTACCTGTTATGACCTCTAAGAAAGCTGGCCGCTGCTTATTCAATAGGTGGGACCCTTTGCTCTCATTCTCCACATCAAAA
GAGACAGCAGCTCCAAAGCTGCGCTTATTCTGTGCCACCTGAGATTCAATCTTTTGCAAATGTTCTTGTAAGGCTTGAACTGCCTCTTTTGCATG
AAGACCATGCAAGTCCAGTGTCCATTGATCATTCTTACCGTTGCAGGCAGTCAAAATTTCTTTTGCAGCCTGGGCATTTAGCCTATTAGCAGCAT
CCCACTCTTCTTGGGCTTTTAGAGAAAAATGTTGGGCAGATAAGTGGTCTCCTCTGAGATAGGCCTCACTGGCAGCCTTAGAATGTCGGGCTGCC
GACCTCGTCATCTTCACTGCATCCTTCCGATGGATCGAGTAAATATCATCCTCTTCCCACTCAGGCTCAACCGGTACAAAGCTCATACTCCCCAC
TGCTCCATCAAAATGAAGTTTGTTCTCGTGAGAAACACAGTTATTTATTAGTTCCTGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E301844] SGN-U572767 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T114603 [Download] [View] Facility Assigned ID: TRDDS14TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5