EST details — SGN-E301983
| Search information |
| Request: 301983 | Match: SGN-E301983 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C94344 | Clone name: cLEX-3-L22 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192143 [TUS-64-N13] | Trace: SGN-T344042 | EST: SGN-E543167 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192143 [TUS-64-N13] | Trace: SGN-T344043 | EST: SGN-E543168 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E301983 | Length: 643 bp (872 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E301983 [] (trimmed)
GCCACCATCTGTTACTGCTACTCTTGTCACCCCACCCCCTCATCATACCCTCCACCCCTAAATCCACACTCTACTCCCCCTTATACCCACTACCC
CTCTCCACAGCCTCATTTCTGTACTTCCCATCTGGTCCCACCACCACCATCGCCGCCGCCTTCTCATATCCAATGCCAATGTGAAACCGTTCACC
AAAATCATCATCATTTTCAAGAATTGAATCATCAAGCCAACAAAGTAACAGACCAACAAACCCAACGAATTGTTACATCTCTTCTCCGTCGGATC
GCTGCCTTAGAATCTTCTCTCAGCCGGAGCTCCTCTACTTCTTCTGTTTCTTCTCGTTCTCGTCAAACGTTACGCGATGCTGCAGCGCGTACTAT
TCAGACCCATTTCAGAGCCTTCCTTGCTCGTAGATCGAGAACACTTCGACAGCTGAAGCAGTTGGCTTCCATCAAAACAACTCTCTATGTTCTCA
AATCGTCAGTTTCTGGTAAAATACACATTGATATTCGAGCTGTTACTCGCAGAGCGACGGATTTACTCGTTAGACTTGATTGTATTGAGGGCGAT
GATCCGTTAATCAGAGATGGTAGAAGGTCAATAAGCAACGAACTGACTCGATTTATGAAGGTGATTAATGGGG
CTCTCCACAGCCTCATTTCTGTACTTCCCATCTGGTCCCACCACCACCATCGCCGCCGCCTTCTCATATCCAATGCCAATGTGAAACCGTTCACC
AAAATCATCATCATTTTCAAGAATTGAATCATCAAGCCAACAAAGTAACAGACCAACAAACCCAACGAATTGTTACATCTCTTCTCCGTCGGATC
GCTGCCTTAGAATCTTCTCTCAGCCGGAGCTCCTCTACTTCTTCTGTTTCTTCTCGTTCTCGTCAAACGTTACGCGATGCTGCAGCGCGTACTAT
TCAGACCCATTTCAGAGCCTTCCTTGCTCGTAGATCGAGAACACTTCGACAGCTGAAGCAGTTGGCTTCCATCAAAACAACTCTCTATGTTCTCA
AATCGTCAGTTTCTGGTAAAATACACATTGATATTCGAGCTGTTACTCGCAGAGCGACGGATTTACTCGTTAGACTTGATTGTATTGAGGGCGAT
GATCCGTTAATCAGAGATGGTAGAAGGTCAATAAGCAACGAACTGACTCGATTTATGAAGGTGATTAATGGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E301983] | SGN-U573942 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T115313 [Download] [View] | Facility Assigned ID: TRXAL71TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 14.5 |
Working
