EST details — SGN-E302279
Search information |
Request: 302279 | Match: SGN-E302279 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C89884 | Clone name: cLEW-19-N1 |
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Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E302279 | Length: 533 bp (889 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E302279 [] (trimmed)
GCACACTCAACGCACACACACACACACACACCAAAAAGTAAAATAAACATGCCCATCATATCTACTACTTCCCCTCGTTCGTTTCTTCAAACTCC
GCCACCGCCGGTGAATATATTTTCCTCCGGCGATAATTCTCTTCTATCACCGTCTTCCGTCAGATTCCGTCAGTCCGGTAACTTCACCACCGCCG
CAGCGGCGGCGGCGACTTGCGCTTCCGTCGAAACTGAATCTACCACGTCAAGGTACTCGACGCTGCCTTCTGACATTATCCATGCTTCTTCGGCG
TCTTTCTACGAGATTCTAGGGATTCCGATCGGCGCTACGATCCAGGAGATCAAGGCAGCTTATCGGAGATTAGCTAGGGTTTGTCATCCTGATGT
GGCGGCAATTGATCAGAAGGACACGTCGGCGGACGATTTCATGAAGATTCATTCTGCCTATTCTACTCTTTCGGATCCGGATAAACGCGCCGATT
ATGACCGCCGCCTATTCCGGAGGCGCCGGAACGTCAATTTATACTCCGGCGGCTGTTC
GCCACCGCCGGTGAATATATTTTCCTCCGGCGATAATTCTCTTCTATCACCGTCTTCCGTCAGATTCCGTCAGTCCGGTAACTTCACCACCGCCG
CAGCGGCGGCGGCGACTTGCGCTTCCGTCGAAACTGAATCTACCACGTCAAGGTACTCGACGCTGCCTTCTGACATTATCCATGCTTCTTCGGCG
TCTTTCTACGAGATTCTAGGGATTCCGATCGGCGCTACGATCCAGGAGATCAAGGCAGCTTATCGGAGATTAGCTAGGGTTTGTCATCCTGATGT
GGCGGCAATTGATCAGAAGGACACGTCGGCGGACGATTTCATGAAGATTCATTCTGCCTATTCTACTCTTTCGGATCCGGATAAACGCGCCGATT
ATGACCGCCGCCTATTCCGGAGGCGCCGGAACGTCAATTTATACTCCGGCGGCTGTTC
Unigenes |
Current Unigene builds | |||||
[SGN-E302279] | SGN-U573837 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T113703 [Download] [View] | Facility Assigned ID: TRDCW73TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.980 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |