EST details — SGN-E302511
Search information |
Request: 302511 | Match: SGN-E302511 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C93903 | Clone name: cLEX-1-C5 |
| ||
Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C93903 [cLEX-1-C5] | Trace: SGN-T115095 | EST: SGN-E302512 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E302511 | Length: 526 bp (901 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E302511 [] (trimmed)
TGCTCATGAAAATATTAAAGATATTGATCAACAAGATGAGATGATAAATATCAAAGCTGAATTCGTTGAAACAAGCAAAGAATCAGATAATAATG
AAATAATTCAAGAAAAGTCATCATCATGTCTTCCTGACTTAAATCTTGAACTCAGAATTAGTCCTCCACATCATCAACAACTCGATCATCATCGT
CATCATCAACGATCAAGCTCTTTATGTTTTACATGTAGTTTGGGAATTCAAAATAGTAAAGATTGCAGTTGTGGAAGTGAAAGTAATGGAAATGG
ATGGAGTAATAATATGGTAAGTATGAACATTATGGCTGGTTATGACTTTTTGGGCTTGAAGACTAATGGTCTTTTGGACTATAGAACTTTGGAAA
CTAAGTGATTCGATTCGATTCGAATTTATGCATAAATCATCTTAATTTGATGTATATGTAGAAAAGAAAAAGAGTTTGAGGATATTATTTCTTCT
AGCTAATAATTTTCTCATGGTTGTAAACTTTGCAATATAGTAATTACATTT
AAATAATTCAAGAAAAGTCATCATCATGTCTTCCTGACTTAAATCTTGAACTCAGAATTAGTCCTCCACATCATCAACAACTCGATCATCATCGT
CATCATCAACGATCAAGCTCTTTATGTTTTACATGTAGTTTGGGAATTCAAAATAGTAAAGATTGCAGTTGTGGAAGTGAAAGTAATGGAAATGG
ATGGAGTAATAATATGGTAAGTATGAACATTATGGCTGGTTATGACTTTTTGGGCTTGAAGACTAATGGTCTTTTGGACTATAGAACTTTGGAAA
CTAAGTGATTCGATTCGATTCGAATTTATGCATAAATCATCTTAATTTGATGTATATGTAGAAAAGAAAAAGAGTTTGAGGATATTATTTCTTCT
AGCTAATAATTTTCTCATGGTTGTAAACTTTGCAATATAGTAATTACATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E302511] | SGN-U563435 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T115094 [Download] [View] | Facility Assigned ID: TRXAA15TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.916 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 12.5 |