EST details — SGN-E302600
| Search information |
| Request: 302600 | Match: SGN-E302600 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C93895 | Clone name: cLEX-1-C19 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C93895 [cLEX-1-C19] | Trace: SGN-T115184 | EST: SGN-E302601 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C192061 [TUS-64-K3] | Trace: SGN-T343901 | EST: SGN-E543026 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E302600 | Length: 696 bp (916 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E302600 [] (trimmed)
GAAAACTTCAAGATAACAGATTAATCCAGATGTTGAAAGGCTTCCTCTTTGTTTGGCTTATTGCTTTTTCTTTAGCAACAATAGCTGTTGCACAA
AACAACCAAACAGGATTCATAAGCCTAGATTGTGGAATACCAGCACGTTCAAACTATACAGATATAACAACAGGACTATTTTACACTTCAGATGT
AGGTTATGTCAGTGGTGGGGTGAAAAATAACATATCATCAAAATACCAATCCAATTCCCTAGAAAGACAATTTCTCACAGTTACAAGCTTTCCAA
CAGGGACCAAAAATTGCTACACTTTGACTCCAGCTCAAGGAAACTCTGGCAGATACTTGATAAGGGCAAGTTTTTTCTACGGAGATTATGATAAT
GGAAATGATCGATTCCCCTATTTTGATCTTTACATTGAAGAAAAATATTGGATCACAATCTCAATTTATAATGCTTCTATACCAATTCAAGAGGA
AATTATACACACCCCTTCTAATGCCTCTATAAATATTTGCCTTGTCAAGTTAGATACAACAACTCCTTTCATTTCAGCCTTAGAGTTGAGGCCTG
TGAATATGACCATATACAAAGCAATACTCAACAGTTCAATGGAACTTTTTATCCGTCTTGACTTTGGTTCCTTAACCAATCAGTACGTTAGGTAC
AGCAATGATGCATGGGATAGAGTTTGGAGAC
AACAACCAAACAGGATTCATAAGCCTAGATTGTGGAATACCAGCACGTTCAAACTATACAGATATAACAACAGGACTATTTTACACTTCAGATGT
AGGTTATGTCAGTGGTGGGGTGAAAAATAACATATCATCAAAATACCAATCCAATTCCCTAGAAAGACAATTTCTCACAGTTACAAGCTTTCCAA
CAGGGACCAAAAATTGCTACACTTTGACTCCAGCTCAAGGAAACTCTGGCAGATACTTGATAAGGGCAAGTTTTTTCTACGGAGATTATGATAAT
GGAAATGATCGATTCCCCTATTTTGATCTTTACATTGAAGAAAAATATTGGATCACAATCTCAATTTATAATGCTTCTATACCAATTCAAGAGGA
AATTATACACACCCCTTCTAATGCCTCTATAAATATTTGCCTTGTCAAGTTAGATACAACAACTCCTTTCATTTCAGCCTTAGAGTTGAGGCCTG
TGAATATGACCATATACAAAGCAATACTCAACAGTTCAATGGAACTTTTTATCCGTCTTGACTTTGGTTCCTTAACCAATCAGTACGTTAGGTAC
AGCAATGATGCATGGGATAGAGTTTGGAGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E302600] | SGN-U567709 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T115183 [Download] [View] | Facility Assigned ID: TRXAA22TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.949 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
