EST details — SGN-E302751
Search information |
Request: 302751 | Match: SGN-E302751 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C97171 | Clone name: cLEY-1-I7 |
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Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C97171 [cLEY-1-I7] | Trace: SGN-T118433 | EST: SGN-E302750 | Direction: 5' | Facility: TIGR |
Clone: SGN-C192647 [TUS-66-C13] | Trace: SGN-T344908 | EST: SGN-E544033 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C192647 [TUS-66-C13] | Trace: SGN-T344909 | EST: SGN-E544034 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E302751 | Length: 201 bp (837 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E302751 [] (trimmed)
GACTTCAGAATATTACAACAGTACTGACTAAAGTAGAAACATAACTTCAAACATTTGGTTCAAAGGGCTCTGCAGAAGAGATCTACAACCAACAA
AATTGAGTTAAGAGAAGTATAAACCACATTTCTAATGAGGCAAAAAATTCCTAATGTGTTAGTCATTATTTGCCGCGGACCTGCCAAGATTTACG
CATCCCCTAGC
AATTGAGTTAAGAGAAGTATAAACCACATTTCTAATGAGGCAAAAAATTCCTAATGTGTTAGTCATTATTTGCCGCGGACCTGCCAAGATTTACG
CATCCCCTAGC
Unigenes |
Current Unigene builds | |||||
[SGN-E302751] | SGN-U562800 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T118434 [Download] [View] | Facility Assigned ID: TRYAA52TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.940 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 14.5 |