EST details — SGN-E303323
| Search information |
| Request: 303323 | Match: SGN-E303323 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C94194 | Clone name: cLEX-2-M17 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192119 [TUS-64-M13] | Trace: SGN-T344001 | EST: SGN-E543126 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192119 [TUS-64-M13] | Trace: SGN-T344002 | EST: SGN-E543127 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E303323 | Length: 662 bp (826 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E303323 [] (trimmed)
GAGGAAGGAGTCTCCGACGACTTTATCGTCCAATTGGTATCAGAAATAAAAGCAGAATATTTTCCACCAAAAGTGGATATTGTCATACAAAATGA
GATACCAACAGATTTCTACATTATTGTATCTGGGGCTGTGGATGTTGTAACATACAAGAACGGAATGGAACAATTTTTATCCAAGTTGGGATCTC
AACAAATGTTTGGAGAAATAGGTGTAATATTCAATATCCCTCAACCTTTCACAGTGAGAACTAAAAGGCTTTCTCAAGTTGTTCGTATTAGTCAT
CATCATTTCAAGCAATTGGTACAACCCCTTCATGAAGATGGAAAAATAATTCACACTAATTTTATTCATCATTTGAAGGGATTGAAAAATGAGGA
GCTAGCTGAGATGCCGCTAATATCAGAATTTCTTGATGATTTAATTAGTGAGGAAGCCTCGATGAATGAGGCCGGAGCTCAAGACCAACAAGAAA
ACGAGTTATCGGCAACTACTTCTTCGTTATCAAAAACACCTTCTACTAGAGTGATAATTCACGGATATCACCCGGATCATAAGCCAAAATCAGGA
GGAAAACTTATACATCTACCTGATTCAATTGAAAATCTTCATAGTATTGCAGAAAGTAAGTTTGGGAGAAGAGGAAGTACGATTCTCATGGC
GATACCAACAGATTTCTACATTATTGTATCTGGGGCTGTGGATGTTGTAACATACAAGAACGGAATGGAACAATTTTTATCCAAGTTGGGATCTC
AACAAATGTTTGGAGAAATAGGTGTAATATTCAATATCCCTCAACCTTTCACAGTGAGAACTAAAAGGCTTTCTCAAGTTGTTCGTATTAGTCAT
CATCATTTCAAGCAATTGGTACAACCCCTTCATGAAGATGGAAAAATAATTCACACTAATTTTATTCATCATTTGAAGGGATTGAAAAATGAGGA
GCTAGCTGAGATGCCGCTAATATCAGAATTTCTTGATGATTTAATTAGTGAGGAAGCCTCGATGAATGAGGCCGGAGCTCAAGACCAACAAGAAA
ACGAGTTATCGGCAACTACTTCTTCGTTATCAAAAACACCTTCTACTAGAGTGATAATTCACGGATATCACCCGGATCATAAGCCAAAATCAGGA
GGAAAACTTATACATCTACCTGATTCAATTGAAAATCTTCATAGTATTGCAGAAAGTAAGTTTGGGAGAAGAGGAAGTACGATTCTCATGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E303323] | SGN-U564485 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T115411 [Download] [View] | Facility Assigned ID: TRXAE81TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 14.5 |
Working
