EST details — SGN-E303323
Search information |
Request: 303323 | Match: SGN-E303323 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C94194 | Clone name: cLEX-2-M17 |
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Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C192119 [TUS-64-M13] | Trace: SGN-T344001 | EST: SGN-E543126 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C192119 [TUS-64-M13] | Trace: SGN-T344002 | EST: SGN-E543127 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E303323 | Length: 662 bp (826 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E303323 [] (trimmed)
GAGGAAGGAGTCTCCGACGACTTTATCGTCCAATTGGTATCAGAAATAAAAGCAGAATATTTTCCACCAAAAGTGGATATTGTCATACAAAATGA
GATACCAACAGATTTCTACATTATTGTATCTGGGGCTGTGGATGTTGTAACATACAAGAACGGAATGGAACAATTTTTATCCAAGTTGGGATCTC
AACAAATGTTTGGAGAAATAGGTGTAATATTCAATATCCCTCAACCTTTCACAGTGAGAACTAAAAGGCTTTCTCAAGTTGTTCGTATTAGTCAT
CATCATTTCAAGCAATTGGTACAACCCCTTCATGAAGATGGAAAAATAATTCACACTAATTTTATTCATCATTTGAAGGGATTGAAAAATGAGGA
GCTAGCTGAGATGCCGCTAATATCAGAATTTCTTGATGATTTAATTAGTGAGGAAGCCTCGATGAATGAGGCCGGAGCTCAAGACCAACAAGAAA
ACGAGTTATCGGCAACTACTTCTTCGTTATCAAAAACACCTTCTACTAGAGTGATAATTCACGGATATCACCCGGATCATAAGCCAAAATCAGGA
GGAAAACTTATACATCTACCTGATTCAATTGAAAATCTTCATAGTATTGCAGAAAGTAAGTTTGGGAGAAGAGGAAGTACGATTCTCATGGC
GATACCAACAGATTTCTACATTATTGTATCTGGGGCTGTGGATGTTGTAACATACAAGAACGGAATGGAACAATTTTTATCCAAGTTGGGATCTC
AACAAATGTTTGGAGAAATAGGTGTAATATTCAATATCCCTCAACCTTTCACAGTGAGAACTAAAAGGCTTTCTCAAGTTGTTCGTATTAGTCAT
CATCATTTCAAGCAATTGGTACAACCCCTTCATGAAGATGGAAAAATAATTCACACTAATTTTATTCATCATTTGAAGGGATTGAAAAATGAGGA
GCTAGCTGAGATGCCGCTAATATCAGAATTTCTTGATGATTTAATTAGTGAGGAAGCCTCGATGAATGAGGCCGGAGCTCAAGACCAACAAGAAA
ACGAGTTATCGGCAACTACTTCTTCGTTATCAAAAACACCTTCTACTAGAGTGATAATTCACGGATATCACCCGGATCATAAGCCAAAATCAGGA
GGAAAACTTATACATCTACCTGATTCAATTGAAAATCTTCATAGTATTGCAGAAAGTAAGTTTGGGAGAAGAGGAAGTACGATTCTCATGGC
Unigenes |
Current Unigene builds | |||||
[SGN-E303323] | SGN-U564485 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T115411 [Download] [View] | Facility Assigned ID: TRXAE81TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.960 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 14.5 |