EST details — SGN-E303379
Search information |
Request: 303379 | Match: SGN-E303379 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C94109 | Clone name: cLEX-2-H5 |
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Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E303379 | Length: 644 bp (851 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E303379 [] (trimmed)
GCATGCTCGAGTTTTAGGACTTCTTATGGCCTTCTTCATGACTGTCCTGATGCTTTTCCGCTCAGTTACATGCCGTGTTACCAAGAAACTTCAAG
ATGTATCGACTGTTGAGAACCAAGATATTCAAGACTTCACTTTTGATGCTAGCCCTAAAGAAGAGTTTCGACCCCCTTCACCTACTCCAGCCTTT
ACAGAAGCTCAACTGCTCTCCGTTGTTCTCAAGAGACTGGGCGAACTTGAAGACAAAGTAAATACTCTTCAAGAAAAGCCATCTGAGATGCCTTA
TGAAAAGGCGGAATTGCTAAATGCAGCTGTTTGCCGGGTGGATGCCCTAGAAGCTGAGTTAATAGCAACCAAGAAGGCATTACATGAGGCATTGA
TGAGGCAAGAAGAACTTCTCGCTTACATTGACAGTCAAGAAGCTGCCAAGTTCCAGAAAAAGAAGAAGTTTTGCTTTTAAGATGGACGATGGTTC
AGGACAGGGATCTCGGATTTTCCACTGTAGTATCTCGAATGAGATATATATTTGTAATGTGTTGTCAATACTCCCAGTCATTGTGCAGTGCATCT
GTGTTAAGTTTTTCCTTTTTGGATCGTGTATTTCATTTACAAAATGAGGTGAACACTTGCTCATAATGTGAAAA
ATGTATCGACTGTTGAGAACCAAGATATTCAAGACTTCACTTTTGATGCTAGCCCTAAAGAAGAGTTTCGACCCCCTTCACCTACTCCAGCCTTT
ACAGAAGCTCAACTGCTCTCCGTTGTTCTCAAGAGACTGGGCGAACTTGAAGACAAAGTAAATACTCTTCAAGAAAAGCCATCTGAGATGCCTTA
TGAAAAGGCGGAATTGCTAAATGCAGCTGTTTGCCGGGTGGATGCCCTAGAAGCTGAGTTAATAGCAACCAAGAAGGCATTACATGAGGCATTGA
TGAGGCAAGAAGAACTTCTCGCTTACATTGACAGTCAAGAAGCTGCCAAGTTCCAGAAAAAGAAGAAGTTTTGCTTTTAAGATGGACGATGGTTC
AGGACAGGGATCTCGGATTTTCCACTGTAGTATCTCGAATGAGATATATATTTGTAATGTGTTGTCAATACTCCCAGTCATTGTGCAGTGCATCT
GTGTTAAGTTTTTCCTTTTTGGATCGTGTATTTCATTTACAAAATGAGGTGAACACTTGCTCATAATGTGAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E303379] | SGN-U563075 | Tomato 200607 | Build 2 | 28 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T115467 [Download] [View] | Facility Assigned ID: TRXAG39TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |