EST details — SGN-E303638
Search information |
Request: 303638 | Match: SGN-E303638 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C98363 | Clone name: cLEY-6-C11 |
| ||
Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C98363 [cLEY-6-C11] | Trace: SGN-T118544 | EST: SGN-E303579 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E303638 | Length: 472 bp (860 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E303638 [] (trimmed)
AGATCAACTGCTCAGTTTCTATTAGTAATTTGGATGTGAAATACATTACTTGCTAGCTGGATTTATTAATGCAGCTGTGAAATACACTATTTCTT
CAAAAGTGTCATATGTACACTAAGCATTCTTTGTGAACTTACAACATAATTCAATATTCTGCAAAAACGAGATATAGTTCAACATCATGACTTGC
CATTAGTTAGCAAGTCCTTGTTTCCTGCCATCCTCATTTGGTGAATTCACGACTACATCTGTCAGCTTGCAAGGCTCGGCTTCTTCCAGCATATG
AACTACCATCCTCATGGAAGGTCTTAATGCTGGCGTCCTTGATGTGCAATGAACTGCAATTTTAAGAACCTCAACTGCATCTTCTTTGAACCCCT
CGAAAATGCTTGAATCCACCAAATCGATCATGCTAGTATTGTTTCTTATCTTGCTACAAACCCATTGGACTATGTCAATGTTCTCCCCGTAT
CAAAAGTGTCATATGTACACTAAGCATTCTTTGTGAACTTACAACATAATTCAATATTCTGCAAAAACGAGATATAGTTCAACATCATGACTTGC
CATTAGTTAGCAAGTCCTTGTTTCCTGCCATCCTCATTTGGTGAATTCACGACTACATCTGTCAGCTTGCAAGGCTCGGCTTCTTCCAGCATATG
AACTACCATCCTCATGGAAGGTCTTAATGCTGGCGTCCTTGATGTGCAATGAACTGCAATTTTAAGAACCTCAACTGCATCTTCTTTGAACCCCT
CGAAAATGCTTGAATCCACCAAATCGATCATGCTAGTATTGTTTCTTATCTTGCTACAAACCCATTGGACTATGTCAATGTTCTCCCCGTAT
Unigenes |
Current Unigene builds | |||||
[SGN-E303638] | SGN-U577069 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T118603 [Download] [View] | Facility Assigned ID: TRYAU18TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.949 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 20.5 |