EST details — SGN-E304090
| Search information |
| Request: 304090 | Match: SGN-E304090 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C94970 | Clone name: cLEX-6-J23 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192277 [TUS-65-D3] | Trace: SGN-T344272 | EST: SGN-E543397 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E304090 | Length: 711 bp (968 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E304090 [] (trimmed)
GGTGTTTTTGCTTCTTCTCTCTATCTATACCTATTCTGAACGAATCCTCCATATATTTGTGTTGATTTGAGTTAACTCTAATGCTGAACAATTGT
GTTTGCAGATGTTTACATTGCAGCACCCTGCATTTCTTTTCCAGGTGCCACGGAGCAGGGTTTCACCTCAACGGCAGTCATTTCTAAGCTCTCCC
ATTCGTTCCCGTTTTCATTTTCTTCCTAATCAAATGGCGAAAACCACAGATTTCCTAACCTTATTTGAAGAAGAAGAAAATAACAACGACGCTGA
TGGGGTTGGCGGTAGAGAAGATGATGAGAAGAATTATGACAAAGATCCTGAACTTGCTGATATTCTTGGCACCTGTCTTGATGATCCCGATAAGG
CTAAGTCAAGGTTGGAGGAGAGATTGAGAAAGAAAAGGAATAAAATTGTACATACAAAGACAGGTTCACCAACACCCATGACAGTCGAATTCAAC
AAATTTGATTATTCAAACACCTTTATATGGTTTGAGTTCTACAATGCCCCATTGGAGAAGGACATCTCCTTGATTTGTGACACAATTCGGTCTTG
GCACATTGTTGGACGTCTTGGTGGATGTAATTCGATGAATATGCAATTGTCCCAATCTCCTTTGGACAAAAGACCAAATTATGATGCTGTTCAGG
GGGCAAATGTAACACCTACTACATTCTATAATATTGGAGATGTTGA
GTTTGCAGATGTTTACATTGCAGCACCCTGCATTTCTTTTCCAGGTGCCACGGAGCAGGGTTTCACCTCAACGGCAGTCATTTCTAAGCTCTCCC
ATTCGTTCCCGTTTTCATTTTCTTCCTAATCAAATGGCGAAAACCACAGATTTCCTAACCTTATTTGAAGAAGAAGAAAATAACAACGACGCTGA
TGGGGTTGGCGGTAGAGAAGATGATGAGAAGAATTATGACAAAGATCCTGAACTTGCTGATATTCTTGGCACCTGTCTTGATGATCCCGATAAGG
CTAAGTCAAGGTTGGAGGAGAGATTGAGAAAGAAAAGGAATAAAATTGTACATACAAAGACAGGTTCACCAACACCCATGACAGTCGAATTCAAC
AAATTTGATTATTCAAACACCTTTATATGGTTTGAGTTCTACAATGCCCCATTGGAGAAGGACATCTCCTTGATTTGTGACACAATTCGGTCTTG
GCACATTGTTGGACGTCTTGGTGGATGTAATTCGATGAATATGCAATTGTCCCAATCTCCTTTGGACAAAAGACCAAATTATGATGCTGTTCAGG
GGGCAAATGTAACACCTACTACATTCTATAATATTGGAGATGTTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E304090] | SGN-U583770 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T116108 [Download] [View] | Facility Assigned ID: TRXAW60TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0087 | Quality Trim Threshold: 14.5 |
Working
